Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0126
(796 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2... 116 2e-26
At4g35090.1 68417.m04984 catalase 2 identical to catalase 2 SP:P... 114 7e-26
At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to c... 109 3e-24
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to c... 109 3e-24
At3g14205.1 68416.m01795 phosphoinositide phosphatase family pro... 31 0.88
At5g07980.1 68418.m00928 dentin sialophosphoprotein-related cont... 30 2.0
At5g07970.1 68418.m00926 dentin sialophosphoprotein-related cont... 30 2.0
At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family pr... 30 2.0
At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family pr... 29 4.7
At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to R... 29 4.7
At5g55540.1 68418.m06919 expressed protein 28 6.2
At5g07940.1 68418.m00920 expressed protein 28 6.2
At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative simila... 28 8.2
At3g47890.1 68416.m05222 ubiquitin carboxyl-terminal hydrolase-r... 28 8.2
At1g17030.1 68414.m02069 expressed protein 28 8.2
>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1
GI:2511725 from [Arabidopsis thaliana]
Length = 492
Score = 116 bits (279), Expect = 2e-26
Identities = 54/84 (64%), Positives = 66/84 (78%)
Frame = +2
Query: 257 IPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRD 436
IPERVVHA+GA A G+FEVTHDIT+ ++A G +TP+ VRFSTV E GS +T+RD
Sbjct: 59 IPERVVHARGASAKGFFEVTHDITQLTSADFLRGPGVQTPVIVRFSTVIHERGSPETLRD 118
Query: 437 PRGFAVKFYTDDGVWDLVGNNTPI 508
PRGFAVKFYT +G +DLVGNN P+
Sbjct: 119 PRGFAVKFYTREGNFDLVGNNFPV 142
Score = 92.7 bits (220), Expect = 3e-19
Identities = 39/91 (42%), Positives = 55/91 (60%)
Frame = +1
Query: 508 FFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLXXFGDRGIPDGYRHM 687
FF+RD FP +H K NP +H+++ DF + PE++H F D GIP YRHM
Sbjct: 143 FFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFLFDDLGIPQDYRHM 202
Query: 688 NGYGSHTFKLVNSQGVGYWVKFHYKLTRGLK 780
G G +T+ L+N G ++VKFH+K T G+K
Sbjct: 203 EGAGVNTYMLINKAGKAHYVKFHWKPTCGIK 233
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +3
Query: 117 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRE 254
DSP F TT SGAPV + TVG GP LL+D + L+++++FDRE
Sbjct: 13 DSP-FFTTNSGAPVWNNNSSLTVGTRGPILLEDYHLLEKLANFDRE 57
>At4g35090.1 68417.m04984 catalase 2 identical to catalase 2
SP:P25819, GI:17865693 from [Arabidopsis thaliana]
Length = 492
Score = 114 bits (274), Expect = 7e-26
Identities = 53/84 (63%), Positives = 65/84 (77%)
Frame = +2
Query: 257 IPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRD 436
IPERVVHA+GA A G+FEVTHDI+ + A + G +TP+ VRFSTV E GS +T+RD
Sbjct: 59 IPERVVHARGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 118
Query: 437 PRGFAVKFYTDDGVWDLVGNNTPI 508
PRGFAVKFYT +G +DLVGNN P+
Sbjct: 119 PRGFAVKFYTREGNFDLVGNNFPV 142
Score = 90.6 bits (215), Expect = 1e-18
Identities = 39/92 (42%), Positives = 57/92 (61%)
Frame = +1
Query: 508 FFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLXXFGDRGIPDGYRHM 687
FFIRD FP +H K NP +H+++ DF + PE+++ F D GIP YRHM
Sbjct: 143 FFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLNMFTFLFDDIGIPQDYRHM 202
Query: 688 NGYGSHTFKLVNSQGVGYWVKFHYKLTRGLKT 783
+G G +T+ L+N G ++VKFH+K T G+K+
Sbjct: 203 DGSGVNTYMLINKAGKAHYVKFHWKPTCGVKS 234
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +3
Query: 117 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRE 254
+SP F TT SGAPV + TVG GP LL+D + ++++++FDRE
Sbjct: 13 NSP-FFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRE 57
>At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 427
Score = 109 bits (261), Expect = 3e-24
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +2
Query: 257 IPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRD 436
IPERVVHA+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +T+RD
Sbjct: 59 IPERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRD 118
Query: 437 PRGFAVKFYTDDGVWDLVGNNTPI 508
RGFAVKFYT +G +DLVGNNTP+
Sbjct: 119 IRGFAVKFYTREGNFDLVGNNTPV 142
Score = 83.4 bits (197), Expect = 2e-16
Identities = 38/91 (41%), Positives = 54/91 (59%)
Frame = +1
Query: 508 FFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLXXFGDRGIPDGYRHM 687
FFIRD FP +H K NP T++++ D+++ PE++ F D GIP YRHM
Sbjct: 143 FFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLLTWCWMFDDVGIPQDYRHM 202
Query: 688 NGYGSHTFKLVNSQGVGYWVKFHYKLTRGLK 780
G+G HT+ L+ G +VKFH+K T G+K
Sbjct: 203 EGFGVHTYTLIAKSGKVLFVKFHWKPTCGIK 233
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +3
Query: 99 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRE 254
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RE
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRE 57
>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 492
Score = 109 bits (261), Expect = 3e-24
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +2
Query: 257 IPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRD 436
IPERVVHA+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +T+RD
Sbjct: 59 IPERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRD 118
Query: 437 PRGFAVKFYTDDGVWDLVGNNTPI 508
RGFAVKFYT +G +DLVGNNTP+
Sbjct: 119 IRGFAVKFYTREGNFDLVGNNTPV 142
Score = 83.4 bits (197), Expect = 2e-16
Identities = 38/91 (41%), Positives = 54/91 (59%)
Frame = +1
Query: 508 FFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLXXFGDRGIPDGYRHM 687
FFIRD FP +H K NP T++++ D+++ PE++ F D GIP YRHM
Sbjct: 143 FFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLLTWCWMFDDVGIPQDYRHM 202
Query: 688 NGYGSHTFKLVNSQGVGYWVKFHYKLTRGLK 780
G+G HT+ L+ G +VKFH+K T G+K
Sbjct: 203 EGFGVHTYTLIAKSGKVLFVKFHWKPTCGIK 233
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +3
Query: 99 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRE 254
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RE
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRE 57
>At3g14205.1 68416.m01795 phosphoinositide phosphatase family
protein contains similarity to phosphoinositide
phosphatase SAC1 [Rattus norvegicus]
gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
SacI homology domain; identical to SAC domain protein 2
(SAC2) GI:31415720
Length = 808
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 476 LHHQYRTLQQNLEGHEQYQQIHSLHQ-LLRI*QQSVSFCLWTQIL 345
+H R L N+EGH Y+ + ++ L R + +V C+WT L
Sbjct: 176 MHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDCMWTVAL 220
>At5g07980.1 68418.m00928 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 1501
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 425 TVRDPRGFAVKFYTDDGVWDLVGNNTPISL 514
T DP + F +DD +W+ GN+T +SL
Sbjct: 425 TALDPTEEKILFGSDDNLWEAFGNSTDMSL 454
>At5g07970.1 68418.m00926 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 1097
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 425 TVRDPRGFAVKFYTDDGVWDLVGNNTPISL 514
T DP + F +DD +W+ GN+T +SL
Sbjct: 422 TTLDPTEEKILFGSDDNLWEAFGNSTDMSL 451
>At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 326
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 108 TLKDSPGFITTKSGAPVGIKTAIQTVG 188
+L D+PGFI GAP + AI +G
Sbjct: 29 SLADAPGFIKAPGGAPANVAIAISRLG 55
>At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family
protein similar to fructokinase GI:2102693 from
[Lycopersicon esculentum]
Length = 345
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 108 TLKDSPGFITTKSGAPVGIKTAIQTVG 188
+L +SPGF+ GAP + A+ +G
Sbjct: 29 SLSESPGFLKAPGGAPANVAIAVSRLG 55
>At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to RNA
helicase SDE3 [Arabidopsis thaliana] GI:13811296
Length = 1002
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 146 WSSCWNQNGDTNGGQEWS 199
WS WN NG T EWS
Sbjct: 868 WSDGWNNNGGTKEKNEWS 885
>At5g55540.1 68418.m06919 expressed protein
Length = 1380
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 759 IVEFYPVPNTLRIHKLECMGTISIHMSVAIRNTTV 655
+VEF P TLRI++++ G+ + ++ + NTTV
Sbjct: 236 LVEFLPESKTLRIYQIDISGSCRVAAALGM-NTTV 269
>At5g07940.1 68418.m00920 expressed protein
Length = 1526
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 434 DPRGFAVKFYTDDGVWDLVGNNTPISL 514
DP + F +DD +WD G++T +SL
Sbjct: 430 DPTEEKILFGSDDNLWDAFGSSTDMSL 456
>At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative similar
to CAF protein [Arabidopsis thaliana] GI:6102610;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF03368:
Domain of unknown function, PF00636: RNase3 domain,
PF00035: Double-stranded RNA binding motif
Length = 1676
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 492 EIILPFLYKRSNIIPEFYPYSEEKPCNTSERSRHVL 599
EI L L++R +IP+F P + TS+ + ++L
Sbjct: 886 EIALKVLFERGELIPDFVPLELQDSSRTSKSTFYLL 921
>At3g47890.1 68416.m05222 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1568
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = -1
Query: 766 LAYSGILPSTQHLENSQA*MYGNHIHSYVCSHQEYHGL----QTXKEVDGWSLVL 614
+ Y G+ P + S YG H H + SH+ + Q K + WS VL
Sbjct: 1495 IMYRGVDPKNTYSLVSVVCYYGQHYHCFAYSHEHDQWIMYDDQNVKVIGSWSDVL 1549
>At1g17030.1 68414.m02069 expressed protein
Length = 502
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 482 PTLHHQYRTLQQNLEGH 432
P++HH+Y +L N EGH
Sbjct: 190 PSMHHEYTSLVDNEEGH 206
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,833,635
Number of Sequences: 28952
Number of extensions: 430005
Number of successful extensions: 1119
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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