Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0029
(740 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 36 0.028
At4g15780.1 68417.m02402 synaptobrevin-related family protein si... 35 0.065
At3g30420.1 68416.m03847 hypothetical protein low similarity to ... 31 0.80
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 31 0.80
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 31 1.1
At1g18920.1 68414.m02355 hypothetical protein contains Pfam prof... 30 1.4
At3g28790.1 68416.m03593 expressed protein 30 1.9
At1g04760.1 68414.m00472 synaptobrevin family protein similar to... 30 1.9
At1g74770.1 68414.m08663 expressed protein 29 2.4
At5g52280.1 68418.m06488 protein transport protein-related low s... 29 3.2
At2g34230.1 68415.m04188 hypothetical protein contains Pfam prof... 29 3.2
At1g62780.1 68414.m07086 expressed protein 29 3.2
At5g50440.1 68418.m06246 Golgi SNARE protein membrin 12 (MEMB12)... 29 4.3
At5g28400.1 68418.m03448 expressed protein 29 4.3
At5g28320.1 68418.m03438 expressed protein This is likely a pseu... 29 4.3
At2g36900.1 68415.m04526 Golgi SNARE protein membrin 11 (MEMB11)... 29 4.3
At2g34580.1 68415.m04248 hypothetical protein 29 4.3
At2g33610.1 68415.m04119 SWIRM domain-containing protein / DNA-b... 29 4.3
At2g32670.1 68415.m03994 synaptobrevin family protein similar to... 29 4.3
At1g12270.1 68414.m01419 stress-inducible protein, putative simi... 29 4.3
At5g55490.1 68418.m06911 expressed protein 28 7.5
At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein ... 28 7.5
At2g33120.1 68415.m04060 synaptobrevin-related protein / vesicl... 28 7.5
At1g11690.1 68414.m01342 hypothetical protein 28 7.5
At1g04750.1 68414.m00470 synaptobrevin family protein similar to... 28 7.5
At3g22790.1 68416.m02873 kinase interacting family protein simil... 27 9.9
At2g06775.1 68415.m00756 hypothetical protein 27 9.9
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 35.9 bits (79), Expect = 0.028
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 KELETALRQHQNVIED-QAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 436
K+L T L+ H+NVIE+ + Q +E EV ++ L++ LE +I++LE+ N L
Sbjct: 429 KDLITKLKSHENVIEEHKRQVLEASGVADTRKVEVEEALLKL-NTLESTIEELEKENGDL 487
Query: 437 AVDHAADKKHIKSLCSNIDTVEAK 508
A + + + + S D +AK
Sbjct: 488 AEVNIKLNQKLANQGSETDDFQAK 511
>At4g15780.1 68417.m02402 synaptobrevin-related family protein
similar to Vesicle-associated membrane protein 722
(AtVAMP722) Synaptobrevin-related protein 1 (SP:P47192)
{Arabidopsis thaliana}
Length = 194
Score = 34.7 bits (76), Expect = 0.065
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 203 YARRFATGGRTRENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRL 376
+ +R+ G + NKE +++H N I D A+EIE L K + EV L
Sbjct: 90 FKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIML 147
>At3g30420.1 68416.m03847 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 837
Score = 31.1 bits (67), Expect = 0.80
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +2
Query: 263 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANH 430
E+ET LRQH+ + D E + L EVN+S LR ++ +++I D ER H
Sbjct: 293 EIETLLRQHEKSLSDYP---EMPQPEKSILEEVNNSLLR--QEFQINI-DKERETH 342
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 31.1 bits (67), Expect = 0.80
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +2
Query: 176 ARRYHLTSLYARRFATGGRTRENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALR 355
A+ + L+ + + + R EN + E++ R ++V + QEI+ L ++ L+
Sbjct: 682 AKLHELSEKLSFKTSQMERMLENLDEKSNEIDNQKRHEEDVTANLNQEIKILKEEIENLK 741
Query: 356 EVNDSRLRIYEQLELSIQDLER 421
+ DS + EQ E DLE+
Sbjct: 742 KNQDSLMLQAEQAENLRVDLEK 763
>At4g14760.1 68417.m02271 M protein repeat-containing protein
contains Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = +2
Query: 260 KELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLA 439
++ E ++R ++ E EI+ L ++ + L EVN+ Y+Q +I LER
Sbjct: 275 RDAEESVRVFRDQSEQAETEIKALKQELLKLNEVNEDLNVRYQQCLETISKLER-----E 329
Query: 440 VDHAADKKHIKSLCSNIDTVEAKAK 514
V HA D + K L S + AK K
Sbjct: 330 VSHAQD--NAKRLSSEVLAGAAKIK 352
>At1g18920.1 68414.m02355 hypothetical protein contains Pfam profile
PF03794: Domain of Unknown function
Length = 980
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Frame = +2
Query: 305 DQAQEIEYLTKQTVALREVNDSRLRI-------YEQLELSIQDLERANHRLAVDHA-ADK 460
D E+E+L K + L E+ + + + YE+L +S+QD+ ++ H+L +H ++
Sbjct: 688 DHELEVEHLNKVSFLLNELAELNMLVLDHKNVKYEKLCMSLQDICKSIHKLLSEHLHREE 747
Query: 461 KHIKSLCSNIDTVEAKAK 514
+ L + T+E + K
Sbjct: 748 TELWCLFRDCFTIEEQEK 765
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +3
Query: 117 TMSEVMDLV---KKKFGGNEELEQDDITSRRCMLDDLQLAAELGKTLLEATRNSRQPFAS 287
T SEV + +KK+ GN EL+ + M +L+ K L+ R++ A
Sbjct: 449 TSSEVNSFISNLEKKYTGNSELKVFFEKLKTSMSASAKLSTSNAKELVTGMRSAASKIAE 508
Query: 288 IKMLLKIKHKKSNILQSKRLLCER*MIQG*GFMSNWNS 401
M + + KS ++ C++ ++Q + + NS
Sbjct: 509 AMMFVSSRFSKSEETKTSMASCQQEVMQSLKELQDINS 546
>At1g04760.1 68414.m00472 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 220
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +2
Query: 203 YARRFATGGRTRENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRI 382
+ +R+ G + NKE + L++H D +EI L+K + EV +
Sbjct: 89 FNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMEN 148
Query: 383 YEQL 394
E++
Sbjct: 149 IEKV 152
>At1g74770.1 68414.m08663 expressed protein
Length = 985
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 263 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAV 442
ELET + I ++ E+ L T+ + R YE+L LS++++ ++ H+L
Sbjct: 695 ELETKHFDKVSFILNEMSELNMLVS-TINTTAADHDRKMKYERLCLSLREICKSMHKLLS 753
Query: 443 DHAA-DKKHIKSLCSNIDTVEAKAK 514
+H ++ + L N ++E + K
Sbjct: 754 EHIQHEETELWGLFRNCFSIEEQEK 778
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +2
Query: 230 RTRENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQ 409
+TR N + + L+ ++ +E + E E LTK+T+A E N+ RL+ +++
Sbjct: 571 KTRWNNAITAERLQEKCKRLSLEMESKLSEHENLTKKTLA--EANNLRLQ-----NKTLE 623
Query: 410 DLERANHRLAVDHAADKKHI----KSLCSNIDTVEAKAKNYKRL 529
+++ H +KH+ K+L + +E++ +L
Sbjct: 624 EMQEKTHTEITQEKEQRKHVEEKNKALSMKVQMLESEVLKLTKL 667
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/103 (21%), Positives = 42/103 (40%)
Frame = +2
Query: 221 TGGRTRENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLEL 400
T R +E R + E+E+ L +H+N+ + E L Q L E+ + Q +
Sbjct: 579 TAERLQEKCKRLSLEMESKLSEHENLTKKTLAEANNLRLQNKTLEEMQEKTHTEITQEKE 638
Query: 401 SIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKAKNYKRL 529
+ +E N L++ + + L D A A +++
Sbjct: 639 QRKHVEEKNKALSMKVQMLESEVLKLTKLRDESSAAATETEKI 681
>At2g34230.1 68415.m04188 hypothetical protein contains Pfam
profiles PF04780: Protein of unknown function (DUF629),
PF04781: Protein of unknown function (DUF627)
Length = 716
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 219 QLAAELGKTLLEATRNSRQPFASIKMLLKIK-HKKSNILQSKRLLCE 356
QL ++ ++L+ N + +K L ++ H SN+L KRLLCE
Sbjct: 416 QLTTDVRESLVSKVVNQLWENSLVKERLDLEGHTNSNLLLDKRLLCE 462
>At1g62780.1 68414.m07086 expressed protein
Length = 237
Score = 29.1 bits (62), Expect = 3.2
Identities = 32/99 (32%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Frame = +2
Query: 176 ARRYHLTSL-YARRFATGGRTRE---NPTRSNKELETALRQHQNVIEDQAQEIEYLTKQT 343
A+ H+ L + RR RE R KE ALRQ + V + A+ IEY
Sbjct: 41 AQTGHIARLEFKRRLERDSEAREAFQKQLREEKERRQALRQSRVVPDTAAELIEYFLDTE 100
Query: 344 VALREVNDSRLRIYEQLELSIQ-DLERANHRLAVDHAAD 457
E +RLR E Q LE R AV AD
Sbjct: 101 AQEIEYEIARLRGRLNDEFFAQIRLEIGQIRFAVTKTAD 139
>At5g50440.1 68418.m06246 Golgi SNARE protein membrin 12 (MEMB12)
identical to Membrin 12 (AtMEMB12) (Golgi SNAP receptor
complex member 2-2) (GI:27805575)(SP:Q9FK28)
{Arabidopsis thaliana}; similar to Probable 27 kDa Golgi
SNARE protein (Golgi SNAP receptor complex member 2)
(SP:Q9SJL6) [Arabidopsis thaliana]
Length = 219
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 350 LREVNDSRLRIYEQLELSIQDLERANHR---LAVDHAADKKHIKSLCSNIDTV--EAKAK 514
L EV S RI + I+ LER + LA D ++SLCSN+D + K
Sbjct: 9 LSEVYSSAKRILLRARNGIEKLERFDSDPTDLASSVKRDITEVQSLCSNMDGLWRSIPVK 68
Query: 515 NYKRLWTNLTFN*RSTGEELNE 580
+ + LW + E LN+
Sbjct: 69 SQRDLWRRKSEQVGEEAEYLNQ 90
>At5g28400.1 68418.m03448 expressed protein
Length = 996
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 168 ELEQDDITSRRCMLDDLQLAAELGKTLLE 254
E+++D++ SRR LDDL+L + + +LE
Sbjct: 921 EVDEDEVLSRRSGLDDLELVSSRLQKVLE 949
>At5g28320.1 68418.m03438 expressed protein This is likely a
pseudogene.
Length = 967
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 168 ELEQDDITSRRCMLDDLQLAAELGKTLLE 254
E+++D++ SRR LDDL+L + + +LE
Sbjct: 892 EVDEDEVLSRRSGLDDLELVSSRLQKVLE 920
>At2g36900.1 68415.m04526 Golgi SNARE protein membrin 11 (MEMB11) /
Golgi SNAP receptor complex member 2-1 identical to
SP:Q9SJL6; identical to Probable 27 kDa Golgi SNARE
protein (Golgi SNAP receptor complex member 2)
(SP:Q9SJL6) [Arabidopsis thaliana]
Length = 225
Score = 28.7 bits (61), Expect = 4.3
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Frame = +2
Query: 347 ALREVNDSRLRIYEQLELSIQDLERANHR------LAVDHAADKKHIKSLCSNIDTV--E 502
+L +V S RI + I+ LER LA D ++SLCSN+DT+
Sbjct: 11 SLSDVYSSAKRILLKARDGIERLERFESSSMDSPDLASSVKRDITEVRSLCSNMDTLWRS 70
Query: 503 AKAKNYKRLWTNLTFN*RSTGEELN 577
K+ + LW T E LN
Sbjct: 71 IPVKSQRDLWRRKTEQVGEEAEYLN 95
>At2g34580.1 68415.m04248 hypothetical protein
Length = 203
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 293 NVIEDQAQEIEYLTKQTVAL----REVNDSRLRIYEQLELSIQDLERANHRLAVDHAADK 460
+ +++ ++E+ Q + L +E+ ++ +I +IQ +ER L AA
Sbjct: 5 SAFKERLDQMEFTRNQRLNLLQAEKELQVNKAQILASKHATIQSIERRCLMLEQKIAAQN 64
Query: 461 KHIKSLCSNIDTVEAKAKNY 520
I L SNID +++K +Y
Sbjct: 65 LKITILRSNIDDLDSKYHSY 84
>At2g33610.1 68415.m04119 SWIRM domain-containing protein /
DNA-binding family protein contains similarity to
SWI/SNF complex 170 KDa subunit [Homo sapiens]
gi|1549241|gb|AAC50694; contains Pfam domain PF04433:
SWIRM domain, PF00249: Myb-like DNA-binding domain
Length = 469
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Frame = +2
Query: 254 SNKELETALRQHQNVIEDQAQEIEYLTKQT--VALREVNDSRLRIYEQLELSIQ----DL 415
+ E E A +++IE + E+E K+T V ++++ D R+ +E+L+L ++ L
Sbjct: 381 TRNESERAWADAKSLIEKEEHEVEGAIKETVEVEMKKIRD-RIVHFEKLDLEMERSRKQL 439
Query: 416 ERANHRLAVDHAADKKHIKSLCSNIDTVE 502
E + L VD H + D +E
Sbjct: 440 EEVRNLLFVDQLNIFFHTRKARKTEDRIE 468
>At2g32670.1 68415.m03994 synaptobrevin family protein similar to
vesicle-associated membrane protein 7 [Rattus
norvegicus] GI:9502258, SP|P51809 Synaptobrevin-like
protein 1 {Homo sapiens}; contains Pfam profile PF00957:
Synaptobrevin
Length = 285
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = +2
Query: 203 YARRFATGGRTRENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRI 382
+ +R+ G T N+E + L++H D EI L K + EV +
Sbjct: 154 FNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMEN 213
Query: 383 YEQL 394
E++
Sbjct: 214 IEKV 217
>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 572
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 242 NPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREV 361
N K+ ETA++ + IE ++I YLT + E+
Sbjct: 252 NAAYKKKDFETAIQHYSTAIEIDDEDISYLTNRAAVYLEM 291
>At5g55490.1 68418.m06911 expressed protein
Length = 537
Score = 27.9 bits (59), Expect = 7.5
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +2
Query: 248 TRSNKELETALRQHQNVIEDQAQEIEYLTK-QTVALREVNDSRLRIYEQLELSIQDLERA 424
TRS+ + + L Q V D I++LT+ Q+ AL+E ++ R+ E + +DL +
Sbjct: 264 TRSSLDKQQKLLDGQTVALDG---IQFLTRFQSEALQESRNTLQRLKEFSQEQQEDLAKR 320
Query: 425 NHRLAVDHAADKKHIKSLCSNIDTVEAKAKN 517
+L H ++ KS+ EAK N
Sbjct: 321 QEKLQEVHDHLFENSKSMLEAQVAFEAKQAN 351
>At4g01730.1 68417.m00224 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 499
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 132 LLLTLFTVYGTMRYIDVFLSHKLIIMRNGSETS*Y 28
++L LFT YG+ +FL H ++++R G T Y
Sbjct: 248 IILVLFTAYGSAAMGQLFLFH-VVLIRKGMRTYDY 281
>At2g33120.1 68415.m04060 synaptobrevin-related protein /
vesicle-associated membrane protein 722 (VAMP722) (SAR1)
identical to r to Vesicle-associated membrane protein
722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; identical to cDNA
synaptobrevin-related protein (SAR1) GI:600709
Length = 221
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/64 (23%), Positives = 25/64 (39%)
Frame = +2
Query: 203 YARRFATGGRTRENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRI 382
+ +R+ G NKE + L++H D EI L K + EV +
Sbjct: 89 FNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMEN 148
Query: 383 YEQL 394
E++
Sbjct: 149 IEKV 152
>At1g11690.1 68414.m01342 hypothetical protein
Length = 247
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 251 RSNKELETALRQHQNVIEDQAQE-IEYLTKQTVALREVNDSRLRIYEQLELSIQDLERAN 427
+S + + +R +N E+ ++YL ++ RE +L+ I D+E +
Sbjct: 58 KSEETIRCLIRNQRNEKEETTNPFVDYLKEKLSKEREEKKRVKAENSRLKKKILDMESSV 117
Query: 428 HRLAVDHAADKKHIKSLCSNIDTVEAKAKNYKRLW 532
+RL + +K + L + ID ++ N +R+W
Sbjct: 118 NRLRRERDTMEKVCEELVTRIDELKV---NTRRVW 149
>At1g04750.1 68414.m00470 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana};
Length = 219
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/64 (23%), Positives = 25/64 (39%)
Frame = +2
Query: 203 YARRFATGGRTRENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRI 382
+ +R+ G NKE + L++H D EI L K + EV +
Sbjct: 89 FNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMEN 148
Query: 383 YEQL 394
E++
Sbjct: 149 IEKV 152
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 27.5 bits (58), Expect = 9.9
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +2
Query: 230 RTRENPTRSNKELETALRQHQNVIEDQAQ---EIEYLTKQTVALREVNDS-RLRIYEQLE 397
R E + K++ A QN A+ EI+ L + V + EV D RLR Y+Q
Sbjct: 297 RCLEMISNLEKKVRDAEENAQNFSNQSAKAEDEIKALRHELVKVNEVKDGLRLR-YQQCL 355
Query: 398 LSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKAK 514
+I LER V HA D + K L S + AK K
Sbjct: 356 ETISKLER-----EVSHAQD--NAKRLSSEVLAGAAKLK 387
>At2g06775.1 68415.m00756 hypothetical protein
Length = 128
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 164 RRVGARRYHLTSLYARRFATGGRTRENPTRSNKELETALRQHQNVIEDQAQEI 322
+R+G++ + + + +F EN + E+ AL HQ+ I+DQ I
Sbjct: 43 KRIGSKMSEMKAKFEEKFDDLTNRLENMEGALVEINNALLNHQDDIQDQYTRI 95
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,669,892
Number of Sequences: 28952
Number of extensions: 251254
Number of successful extensions: 836
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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