Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0026
(629 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4) id... 66 2e-11
At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4) id... 66 2e-11
At4g00680.1 68417.m00093 actin-depolymerizing factor, putative s... 64 7e-11
At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1) id... 64 7e-11
At1g01750.1 68414.m00094 actin-depolymerizing factor, putative s... 64 7e-11
At3g46000.1 68416.m04977 actin-depolymerizing factor, putative (... 62 2e-10
At5g52360.1 68418.m06497 actin-depolymerizing factor, putative s... 62 4e-10
At4g25590.1 68417.m03687 actin-depolymerizing factor, putative s... 61 5e-10
At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6) id... 60 9e-10
At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3) id... 60 2e-09
At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3) id... 60 2e-09
At3g45990.1 68416.m04976 actin-depolymerizing factor, putative s... 57 8e-09
At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5) id... 54 8e-08
At4g34970.1 68417.m04957 actin-depolymerizing factor, putative s... 50 1e-06
At3g03290.1 68416.m00326 universal stress protein (USP) family p... 31 0.48
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 29 1.9
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 29 2.5
At1g71460.1 68414.m08257 pentatricopeptide (PPR) repeat-containi... 28 4.4
At5g55310.1 68418.m06893 DNA topoisomerase I, putative similar t... 28 5.9
At4g16550.1 68417.m02504 heat shock protein-related contains sim... 28 5.9
At5g11600.1 68418.m01353 expressed protein 27 7.8
At3g43920.1 68416.m04701 ribonuclease III family protein similar... 27 7.8
At2g23190.1 68415.m02770 cytochrome P450, putative Similar to C... 27 7.8
>At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 132
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L G+Q +QATD +E + ++
Sbjct: 69 TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLK 128
Query: 457 EKL 465
++
Sbjct: 129 SRV 131
Score = 56.4 bits (130), Expect = 1e-08
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 53 VTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGTGE 229
+ V D CK + E+K + HR++V+ I + +KQ+ VE VGE YE F L E
Sbjct: 1 MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP---ADE 57
Query: 230 CRYGLFDFD 256
CRY ++DFD
Sbjct: 58 CRYAIYDFD 66
>At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 139
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L G+Q +QATD +E + ++
Sbjct: 76 TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLK 135
Query: 457 EKL 465
++
Sbjct: 136 SRV 138
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 220
ASG+ V D CK + E+K + HR++V+ I + +KQ+ VE VGE YE F L
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP--- 61
Query: 221 TGECRYGLFDFD 256
ECRY ++DFD
Sbjct: 62 ADECRYAIYDFD 73
>At4g00680.1 68417.m00093 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 64.1 bits (149), Expect = 7e-11
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T + +K K+F ++W PDT++V+ KMLY+SS D K+ + G+Q +QATD SE S + ++
Sbjct: 76 TEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIK 135
Query: 457 EKL 465
+L
Sbjct: 136 GRL 138
Score = 55.2 bits (127), Expect = 3e-08
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDLQKG 217
ASG+ V+D CK + E+K + +R++VF I DEK Q+ +E +G Y+ F +
Sbjct: 5 ASGMHVNDECKIKFLELKAKRTYRFIVFKI-DEKAQQVQIEKLGNPEETYDDFTSSIP-- 61
Query: 218 GTGECRYGLFDFD 256
ECRY ++DFD
Sbjct: 62 -DDECRYAVYDFD 73
>At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1)
identical to SP|Q39250 Actin-depolymerizing factor 1
(ADF-1) (AtADF1) {Arabidopsis thaliana}
Length = 139
Score = 64.1 bits (149), Expect = 7e-11
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSE 435
T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L G+Q +QATD +E
Sbjct: 76 TAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTE 128
Score = 60.5 bits (140), Expect = 9e-10
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 220
ASG+ V D CK + E+K + HR++V+ I + +KQ+ VE VG+ YE+F L
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP--- 61
Query: 221 TGECRYGLFDFD 256
ECRY ++DFD
Sbjct: 62 ADECRYAIYDFD 73
>At1g01750.1 68414.m00094 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 64.1 bits (149), Expect = 7e-11
Identities = 28/63 (44%), Positives = 44/63 (69%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T E +K K+F ++W PDT++V+ KMLY+SS D K+ L G+Q +QATD SE S + ++
Sbjct: 76 TPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIK 135
Query: 457 EKL 465
++
Sbjct: 136 GRV 138
Score = 55.2 bits (127), Expect = 3e-08
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDLQKG 217
ASG+ VSD CK + E+K + +R++VF I DEK Q+ ++ +G YE F + +
Sbjct: 5 ASGMHVSDECKLKFLELKAKRNYRFIVFKI-DEKAQQVMIDKLGNPEETYEDFTRSIPE- 62
Query: 218 GTGECRYGLFDFD 256
ECRY ++D+D
Sbjct: 63 --DECRYAVYDYD 73
>At3g46000.1 68416.m04977 actin-depolymerizing factor, putative
(ADF2) strong similarity to SP|Q9ZSK3
Actin-depolymerizing factor 4 (ADF-4) (AtADF4)
{Arabidopsis thaliana}; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/62 (43%), Positives = 42/62 (67%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T+E +K K+F ++W PDTAKV+ KM+Y+SS D K+ L G+Q +QATD +E + +
Sbjct: 74 TAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFK 133
Query: 457 EK 462
+
Sbjct: 134 SR 135
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGT 223
ASG+ V D CK + E+K + R +V+ I D KQ+ VE +GE Y+ F L
Sbjct: 5 ASGMAVHDDCKLKFMELKAKRTFRTIVYKIED-KQVIVEKLGEPEQSYDDFAASLP---A 60
Query: 224 GECRYGLFDFD 256
+CRY ++DFD
Sbjct: 61 DDCRYCIYDFD 71
>At5g52360.1 68418.m06497 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 61.7 bits (143), Expect = 4e-10
Identities = 26/62 (41%), Positives = 44/62 (70%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T+E +K K+F ++W PD+++V+ KM+Y+SS D K+ L G+Q +QATD SE S + ++
Sbjct: 74 TAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSLDIIK 133
Query: 457 EK 462
+
Sbjct: 134 SR 135
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGT 223
ASG+ V D CK + E+K + +R+++F I D +Q+ VE +G Y+ F L
Sbjct: 5 ASGMAVEDECKLKFLELKAKRNYRFIIFRI-DGQQVVVEKLGSPQENYDDFTNYLP---P 60
Query: 224 GECRYGLFDFD 256
ECRY ++DFD
Sbjct: 61 NECRYAVYDFD 71
>At4g25590.1 68417.m03687 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 130
Score = 61.3 bits (142), Expect = 5e-10
Identities = 26/62 (41%), Positives = 43/62 (69%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T E +K K+F ++W PD+++V+ KM+Y+SS D K+ L G+Q +QATD SE S + ++
Sbjct: 67 TDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIK 126
Query: 457 EK 462
+
Sbjct: 127 SR 128
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = +2
Query: 53 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 232
+ V D CK + E+K + +R+++F I D +Q+ VE +G + Y+ F L EC
Sbjct: 1 MAVEDECKLKFLELKSKRNYRFIIFRI-DGQQVVVEKLGNPDETYDDFTASLP---ANEC 56
Query: 233 RYGLFDFD 256
RY +FDFD
Sbjct: 57 RYAVFDFD 64
>At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6)
identical to SP|Q9ZSK2 Actin-depolymerizing factor 6
(ADF-6) (AtADF6) {Arabidopsis thaliana}
Length = 146
Score = 60.5 bits (140), Expect = 9e-10
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 47 SGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQKGGT 223
SG+ V+D KTT+ E+++ K HRYVVF I +K++ VE G Y+ FL L
Sbjct: 13 SGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLP---D 69
Query: 224 GECRYGLFDFD 256
+CRY ++DFD
Sbjct: 70 NDCRYAVYDFD 80
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
TSE +K K+F +W P T+ ++ K+LYS+S D L + L G+ IQATD +E E +
Sbjct: 83 TSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLR 142
Query: 457 EK 462
E+
Sbjct: 143 ER 144
>At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 124
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 220
ASG+ V D CK + E+K + HR++++ I + +KQ+ VE +GE +E L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP--- 61
Query: 221 TGECRYGLFDFD 256
ECRY +FDFD
Sbjct: 62 ADECRYAIFDFD 73
>At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 139
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 220
ASG+ V D CK + E+K + HR++++ I + +KQ+ VE +GE +E L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP--- 61
Query: 221 TGECRYGLFDFD 256
ECRY +FDFD
Sbjct: 62 ADECRYAIFDFD 73
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/62 (38%), Positives = 41/62 (66%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
+SE + ++F ++W PDTA+V+ KM+Y+SS D K+ L G+Q +QATD +E + +
Sbjct: 76 SSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFK 135
Query: 457 EK 462
+
Sbjct: 136 SR 137
>At3g45990.1 68416.m04976 actin-depolymerizing factor, putative
similar to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 133
Score = 57.2 bits (132), Expect = 8e-09
Identities = 23/57 (40%), Positives = 40/57 (70%)
Frame = +1
Query: 295 KQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 465
++K+ ++W P TAK++KKM+YSS+ D K+ L G+Q ATDL++ S +A+ ++
Sbjct: 76 ERKICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRRI 132
Score = 44.4 bits (100), Expect = 6e-05
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +2
Query: 53 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVE------TVGERNAEYEQFLEDLQK 214
+ + D CK T+ E+K+ + R +V+ I D Q+ VE GER YE+F L
Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNMQVIVEKHHYKKMHGEREQSYEEFANSLP- 59
Query: 215 GGTGECRYGLFDFD 256
ECRY + D +
Sbjct: 60 --ADECRYAILDIE 71
>At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5)
identical to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}
Length = 143
Score = 54.0 bits (124), Expect = 8e-08
Identities = 20/64 (31%), Positives = 43/64 (67%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T + +K K+F ++W P+ +K++ K+LY++S D L++ L G+ +QATD +E + ++
Sbjct: 80 TVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQ 139
Query: 457 EKLR 468
++ +
Sbjct: 140 DRAK 143
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +2
Query: 38 KMAS-GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQ 211
KMA+ G+ V+D C +++ ++K K HRY+VF I ++ +++ V+ VG Y + L
Sbjct: 6 KMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLP 65
Query: 212 KGGTGECRYGLFDFD 256
+CRY +FDFD
Sbjct: 66 ---VDDCRYAVFDFD 77
>At4g34970.1 68417.m04957 actin-depolymerizing factor, putative
similar to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 130
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 59 VSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGECR 235
++D CK ++ E+K K HRYVV+ + ++ +++ V+ VG Y+ L + +CR
Sbjct: 1 MTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPE---DDCR 57
Query: 236 YGLFDFD 256
Y +FDFD
Sbjct: 58 YAVFDFD 64
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/64 (28%), Positives = 42/64 (65%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T + + K+F ++W P+ +++++KM+Y++S L++ L GV +QATD +E + ++
Sbjct: 67 TVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQ 126
Query: 457 EKLR 468
++ +
Sbjct: 127 DRAK 130
>At3g03290.1 68416.m00326 universal stress protein (USP) family
protein contains Pfam profile: PF00582 universal stress
protein family
Length = 274
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 158 ETVGERNAEYEQFLEDLQKGGTGE 229
ET G+ +EYE+F E+ ++GG GE
Sbjct: 45 ETDGDSTSEYEEFEEEKERGGEGE 68
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 405 EVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARTKPNPLSDTPALTTRGH 560
++ P P+ + +G R P + + NS + + R P P A+TT GH
Sbjct: 62 QLRPPSIPVTTNTGHRHCRPPSNPATTNSGHHQLRPPPPPPPPLSAITTTGH 113
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 486 NSIYTRARTKPNPLSDTPALTTRGHDTTSRLVL 584
N IY++++ K P+++TP L RG +TS V+
Sbjct: 183 NVIYSKSKKKSGPVTETPLL--RGRSSTSHSVI 213
>At1g71460.1 68414.m08257 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 689
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -1
Query: 551 CRQGRSVGERVRFRPSSCVNAVYWRSVARSFSSTAS*DASERSVAWM 411
C+ G R F S NA+ W ++ +++ D + RS+ WM
Sbjct: 363 CKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWM 409
>At5g55310.1 68418.m06893 DNA topoisomerase I, putative similar to
Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis
thaliana]
Length = 917
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +3
Query: 297 TEALPDVVVPGHRQG*E---EDVVL*LVRRSEKVPCRSSEVHPSDRPLGSVSGGRRREAP 467
TEA VVP G E ED + + +R+ ++ P + + + + G + +P
Sbjct: 3 TEAFVKPVVPNGHDGYEDEDEDDIPLVFKRNSNTAATTNRPSPINNAMRNSAIGSTKSSP 62
Query: 468 RHRSPINSIYTRARTKPNPLSDTPAL 545
RSP+ S A + PAL
Sbjct: 63 PMRSPLTSPNRSASSSTRSSMMKPAL 88
>At4g16550.1 68417.m02504 heat shock protein-related contains
similarity to Swiss-Prot:P31170 small heat shock
protein, chloroplast precursor [Arabidopsis thaliana]
Length = 743
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 522 GSVSSELVCKCCLLAIGGAELLFDGLLR 439
G +++++ CKCC G + DG+LR
Sbjct: 96 GGINTKIPCKCCEFFSGFTSHMADGVLR 123
>At5g11600.1 68418.m01353 expressed protein
Length = 242
Score = 27.5 bits (58), Expect = 7.8
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +3
Query: 369 VRRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARTKPNPLSDTPALT 548
++ +K+ S + +P SVS + + + PINS+ T A T S +L
Sbjct: 31 IKDKKKIATSSRPIMSDSKPRSSVSTVTAKSEAKPKVPINSVKTIATT-----SAAASLV 85
Query: 549 TRGHDTTSRLVLITK 593
TTS +V + K
Sbjct: 86 KGKAQTTSTVVSLVK 100
>At3g43920.1 68416.m04701 ribonuclease III family protein similar to
RNA helicase/RNAseIII CAF protein [Arabidopsis thaliana]
GI:6102610; contains Pfam profiles PF02170: PAZ domain,
PF00636: RNase3 domain
Length = 1531
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -3
Query: 468 AELLFDGLLRRFREVGRLDVLLNSDKGL--FQ---SVERARVQHLLLNLG 334
+ L FD LRR +E+G+ D LN D +Q S++ + H L NLG
Sbjct: 224 SHLKFDASLRRLQELGK-DSFLNMDNKFETYQKRLSIDYREILHCLDNLG 272
>At2g23190.1 68415.m02770 cytochrome P450, putative Similar to
Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];
Length = 543
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 441 RRFREVGRLDVLLNSDKGLFQSVERARVQHLLLNL 337
R R +G L++ + F SV + ++HLLL L
Sbjct: 171 RNLRRIGTLEIFSSHKLNGFLSVRKDEIRHLLLRL 205
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,447,279
Number of Sequences: 28952
Number of extensions: 242180
Number of successful extensions: 902
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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