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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0018
         (727 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p...    99   1e-21
At3g22980.1 68416.m02898 elongation factor Tu family protein sim...    58   8e-09
At5g13650.2 68418.m01585 elongation factor family protein contai...    56   3e-08
At1g62750.1 68414.m07082 elongation factor Tu family protein sim...    54   1e-07
At5g13650.1 68418.m01584 elongation factor family protein contai...    54   1e-07
At1g06220.2 68414.m00656 elongation factor Tu family protein sim...    53   2e-07
At1g06220.1 68414.m00655 elongation factor Tu family protein sim...    53   2e-07
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative            51   9e-07
At5g25230.1 68418.m02991 elongation factor Tu family protein tra...    50   2e-06
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati...    49   4e-06
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati...    49   4e-06
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide...    47   1e-05
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-...    46   3e-05
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam...    33   0.15 
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam...    33   0.15 
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ...    32   0.34 
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ...    32   0.34 
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ...    32   0.34 
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ...    32   0.34 
At3g06620.1 68416.m00769 protein kinase family protein contains ...    32   0.45 
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,...    31   0.78 
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl...    30   1.4  
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f...    30   1.8  
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E...    30   1.8  
At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative St...    30   1.8  
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f...    29   3.1  
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit...    29   4.1  
At1g66310.1 68414.m07530 F-box family protein contains F-box dom...    28   5.5  
At3g28790.1 68416.m03593 expressed protein                             27   9.6  
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi...    27   9.6  
At1g12080.2 68414.m01397 expressed protein                             27   9.6  
At1g12080.1 68414.m01396 expressed protein                             27   9.6  

>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
           putative similar to ELONGATION FACTOR 2 GB:O14460 from
           [Schizosaccharomyces pombe]
          Length = 843

 Score =   99 bits (238), Expect = 1e-21
 Identities = 49/70 (70%), Positives = 55/70 (78%)
 Frame = +3

Query: 51  MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 230
           MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA   AG+ R TDTR
Sbjct: 1   MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60

Query: 231 KDEQDRCIPL 260
            DE +R I +
Sbjct: 61  ADEAERGITI 70



 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 48/84 (57%), Positives = 59/84 (70%)
 Frame = +2

Query: 257 IKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 436
           IKST IS+++E+ ++ L   T    R+ +E  +LINLIDSPGHVDFSSEVTAALR+TDGA
Sbjct: 70  IKSTGISLYYEMTDESLKSFTGA--RDGNE--YLINLIDSPGHVDFSSEVTAALRITDGA 125

Query: 437 LXXXXXXXXXXXQTETVLRQAIAE 508
           L           QTETVLRQA+ E
Sbjct: 126 LVVVDCIEGVCVQTETVLRQALGE 149



 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 37/72 (51%), Positives = 47/72 (65%)
 Frame = +1

Query: 511 IKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVLVDPSKGS 690
           I+P+L +NKMDR            YQTF R++EN NVI+ATY D    +G+V V P KG+
Sbjct: 151 IRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDP--LLGDVQVYPEKGT 208

Query: 691 VGFGSGLHGWAF 726
           V F +GLHGWAF
Sbjct: 209 VAFSAGLHGWAF 220


>At3g22980.1 68416.m02898 elongation factor Tu family protein
           similar to eukaryotic translation elongation factor 2
           GB:NP_001952 [Homo sapiens]
          Length = 1015

 Score = 57.6 bits (133), Expect = 8e-09
 Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = +2

Query: 248 LHPIKSTAISMFFELEEKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEVTAALRV 424
           LHP  +  +     L+E+    IT        + K + +NLIDSPGH+DF SEV+ A R+
Sbjct: 38  LHPRLAGKLRFMDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARL 97

Query: 425 TDGALXXXXXXXXXXXQTETVLRQAIAE 508
           +DGAL           QT  VLRQA  E
Sbjct: 98  SDGALVLVDAVEGVHIQTHAVLRQAWIE 125



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
 Frame = +3

Query: 99  RNIRNMSVIAHVDHGKSTLTDSLV--SKAGIIAGARAGETRFTDTRKDEQDRCIPL 260
           R +RN+ ++AHVDHGK+TL D L+  S  G++    AG+ RF D   +EQ R I +
Sbjct: 7   RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITM 62



 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +1

Query: 511 IKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDG--GPMGEVLVDPS 681
           + P L +NK+DR            Y    RIV  VN I++ Y  +     +  +L  PS
Sbjct: 127 LTPCLVLNKIDRLIFELRLSPMEAYTRLIRIVHEVNGIVSAYKSEKYLSDVDSILASPS 185


>At5g13650.2 68418.m01585 elongation factor family protein contains
           Pfam profiles: PF00009 elongation factor Tu GTP binding
           domain,PF00679 elongation factor G C-terminus,  PF03144
           elongation factor Tu domain 2
          Length = 676

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 24/73 (32%), Positives = 46/73 (63%)
 Frame = +3

Query: 42  PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT 221
           PS     +V+  +  +D++ N+RN++++AHVDHGK+TL DS++ +A +    +  + R  
Sbjct: 62  PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIM 121

Query: 222 DTRKDEQDRCIPL 260
           D+   E++R I +
Sbjct: 122 DSNDLERERGITI 134



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +2

Query: 347 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 502
           K   +N+ID+PGH DF  EV   L + DG L           QT  VL++A+
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKAL 195


>At1g62750.1 68414.m07082 elongation factor Tu family protein
           similar to elongation factor G SP:P34811 [Glycine max
           (Soybean)]
          Length = 783

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 33/80 (41%), Positives = 45/80 (56%)
 Frame = +2

Query: 260 KSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 439
           + TA   + E E++  + IT+       +K   IN+ID+PGHVDF+ EV  ALRV DGA+
Sbjct: 131 EGTATMDWMEQEQERGITITSAATTTFWDK-HRINIIDTPGHVDFTLEVERALRVLDGAI 189

Query: 440 XXXXXXXXXXXQTETVLRQA 499
                      Q+ETV RQA
Sbjct: 190 CLFDSVAGVEPQSETVWRQA 209



 Score = 31.1 bits (67), Expect = 0.78
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
 Frame = +3

Query: 99  RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDRCIPL 260
           ++ RN+ ++AH+D GK+T T+ ++   G     + GE    T   D  + EQ+R I +
Sbjct: 94  KDYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQERGITI 149


>At5g13650.1 68418.m01584 elongation factor family protein contains
           Pfam profiles: PF00009 elongation factor Tu GTP binding
           domain,PF00679 elongation factor G C-terminus,  PF03144
           elongation factor Tu domain 2
          Length = 675

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 21/58 (36%), Positives = 40/58 (68%)
 Frame = +3

Query: 87  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCIPL 260
           +D++ N+RN++++AHVDHGK+TL DS++ +A +    +  + R  D+   E++R I +
Sbjct: 76  LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITI 133



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +2

Query: 347 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 502
           K   +N+ID+PGH DF  EV   L + DG L           QT  VL++A+
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKAL 194


>At1g06220.2 68414.m00656 elongation factor Tu family protein
           similar to Cryptosporidium parvum elongation factor-2
           GB:U21667 GI:706974 from [Cryptosporidium parvum]
          Length = 987

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 23/58 (39%), Positives = 35/58 (60%)
 Frame = +2

Query: 335 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAE 508
           +   K +L N++D+PGHV+FS E+TA+LR+ DGA+            TE  +R AI +
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQD 260



 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = +3

Query: 81  GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDRC 251
           G+M     +RN++++ H+ HGK+   D LV +   ++   A      ++TDTR DEQ+R 
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189

Query: 252 IPLNLRP 272
           I +   P
Sbjct: 190 ISIKAVP 196



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = +1

Query: 520 ILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVLVDPSKGSVGF 699
           ++ +NK+DR            Y   +  +E +N  I+  +   G +   L+DP+ G+V F
Sbjct: 265 VVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHISAASTTAGDLP--LIDPAAGNVCF 322

Query: 700 GSGLHGWAF 726
            SG  GW+F
Sbjct: 323 ASGTAGWSF 331


>At1g06220.1 68414.m00655 elongation factor Tu family protein
           similar to Cryptosporidium parvum elongation factor-2
           GB:U21667 GI:706974 from [Cryptosporidium parvum]
          Length = 987

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 23/58 (39%), Positives = 35/58 (60%)
 Frame = +2

Query: 335 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAE 508
           +   K +L N++D+PGHV+FS E+TA+LR+ DGA+            TE  +R AI +
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQD 260



 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = +3

Query: 81  GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDRC 251
           G+M     +RN++++ H+ HGK+   D LV +   ++   A      ++TDTR DEQ+R 
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189

Query: 252 IPLNLRP 272
           I +   P
Sbjct: 190 ISIKAVP 196



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = +1

Query: 520 ILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVLVDPSKGSVGF 699
           ++ +NK+DR            Y   +  +E +N  I+  +   G +   L+DP+ G+V F
Sbjct: 265 VVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHISAASTTAGDLP--LIDPAAGNVCF 322

Query: 700 GSGLHGWAF 726
            SG  GW+F
Sbjct: 323 ASGTAGWSF 331


>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
          Length = 681

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = +3

Query: 102 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCIPLNLR 269
           NIRN S+IAH+DHGKSTL D L+   G +   R  + +F D    E++R I + L+
Sbjct: 85  NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQ 139



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = +2

Query: 353 FLINLIDSPGHVDFSSEVTAALRVTDGAL 439
           F +NLID+PGHVDFS EV+ +L   +GAL
Sbjct: 152 FCLNLIDTPGHVDFSYEVSRSLAACEGAL 180


>At5g25230.1 68418.m02991 elongation factor Tu family protein
           translation Elongation Factor 2, Schizosaccharomyces
           pombe, PIR:T39902
          Length = 973

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 22/58 (37%), Positives = 35/58 (60%)
 Frame = +2

Query: 335 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAE 508
           +   K +L N++D+PG+V+FS E+TA+LR+ DGA+            TE  +R AI +
Sbjct: 189 DSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIRHAIQD 246



 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = +3

Query: 81  GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDRC 251
           G+M     +RN++++ H+ HGK+   D LV +   ++   A      R+TDTR DEQ+R 
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERN 175

Query: 252 IPLNLRP 272
           I +   P
Sbjct: 176 ISIKAVP 182



 Score = 36.7 bits (81), Expect = 0.016
 Identities = 19/69 (27%), Positives = 34/69 (49%)
 Frame = +1

Query: 520 ILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVLVDPSKGSVGF 699
           ++ +NK+DR            Y   +  +E +N  I+  + +   +   L+DP+ G+V F
Sbjct: 251 VVVINKVDRLITELKLPPRDAYYKLRYTIEVINNHISAASTNAADLP--LIDPAAGNVCF 308

Query: 700 GSGLHGWAF 726
            SG  GW+F
Sbjct: 309 ASGTAGWSF 317


>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
           similar to SP|P25039 Elongation factor G 1,
           mitochondrial precursor (mEF-G-1) {Saccharomyces
           cerevisiae}; contains Pfam profiles PF00009: Elongation
           factor Tu GTP binding domain, PF03764: Elongation factor
           G domain IV, PF00679: Elongation factor G C-terminus
          Length = 754

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 24/50 (48%), Positives = 31/50 (62%)
 Frame = +2

Query: 347 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 496
           K + +N+ID+PGHVDF+ EV  ALRV DGA+           Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180



 Score = 31.5 bits (68), Expect = 0.59
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = +3

Query: 87  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 188
           MDK   +RN+ + AH+D GK+TLT+ ++   G I
Sbjct: 62  MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92


>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
           similar to mitochondrial elongation factor GI:3917 from
           [Saccharomyces cerevisiae]
          Length = 754

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 24/50 (48%), Positives = 31/50 (62%)
 Frame = +2

Query: 347 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 496
           K + +N+ID+PGHVDF+ EV  ALRV DGA+           Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180



 Score = 31.5 bits (68), Expect = 0.59
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = +3

Query: 87  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 188
           MDK   +RN+ + AH+D GK+TLT+ ++   G I
Sbjct: 62  MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92


>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
           identical to SWISS-PROT:P17745 elongation factor Tu,
           chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
          Length = 476

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 25/69 (36%), Positives = 37/69 (53%)
 Frame = +3

Query: 57  NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKD 236
           +FTV   RG  ++K+   N+  I HVDHGK+TLT +L      I  + A +    D   +
Sbjct: 63  SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPE 122

Query: 237 EQDRCIPLN 263
           E+ R I +N
Sbjct: 123 ERARGITIN 131


>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
           GTP-binding protein GUF1 - Saccharomyces cerevisiae,
           PIR:S50374
          Length = 661

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = +2

Query: 335 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 439
           ++   G+L+NLID+PGHVDFS EV+ +L    GAL
Sbjct: 129 DQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGAL 163



 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = +3

Query: 105 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQ 242
           IRN S+IAH+DHGKSTL D L+   G I     G+ ++ D  + E+
Sbjct: 66  IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLDKLQRER 110


>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
           profile: PF00628 PHD-finger
          Length = 482

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 519 RLDASAIA*RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 388
           ++D+ A     T S  T  PD  ST T APSVT+  +  + EK+
Sbjct: 372 KVDSEACQNHPTASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415


>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
           profile: PF00628 PHD-finger
          Length = 743

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 519 RLDASAIA*RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 388
           ++D+ A     T S  T  PD  ST T APSVT+  +  + EK+
Sbjct: 633 KVDSEACQNHPTASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676


>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
           identical to SWISS-PROT:P13905 elongation factor 1-alpha
           (EF-1-alpha) [Arabidopsis thaliana]
          Length = 449

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 87  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 182
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32


>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 87  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 182
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32


>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 87  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 182
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32


>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 87  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 182
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32


>At3g06620.1 68416.m00769 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 773

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = -2

Query: 564 LELKKSTVHFVHEQNRLDASAIA*RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 385
           LEL++S  H   E +RL  S    + + SV  H P  ++    APS  +S A +    S 
Sbjct: 14  LELEESQEHLKQEMSRLKVSTELRQRSHSVSPHRPARRNIGEGAPSWRKSGAASFRNASP 73

Query: 384 CPGES 370
              ES
Sbjct: 74  LRKES 78


>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
           putative similar to mitochondrial elongation factor Tu
           [Arabidopsis thaliana] gi|1149571|emb|CAA61511
          Length = 454

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 111 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCIPL 260
           N+  I HVDHGK+TLT ++         A+A      D   +E+ R I +
Sbjct: 69  NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITI 118


>At1g17220.1 68414.m02098 translation initiation factor IF-2,
           chloroplast, putative similar to SP|P57997|IF2C_PHAVU
           Translation initiation factor IF-2, chloroplast
           precursor (PvIF2cp) {Phaseolus vulgaris}
          Length = 1026

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 114 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 215
           ++++ HVDHGK+TL D  + K+ + A    G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536


>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
           factor family protein similar to to PRESSED FLOWER
           (GP:17907768) {Arabidopsis thaliana};
          Length = 268

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +1

Query: 124 SPTSITASQPSRTRWFPRPVSLLVRE 201
           SP+S T+++P R RW P+P  +L+ E
Sbjct: 9   SPSS-TSTEPVRARWSPKPEQILILE 33


>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
           EF-1-alpha, putative contains similarity to
           SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
           [Aeropyrum pernix]
          Length = 667

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 111 NMSVIAHVDHGKSTLTDSLVSKAGIIA 191
           N++++ HVD GKSTL+  L+   G I+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRIS 267


>At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative
           Strong similarity to beta-keto-Coa synthase gb|U37088
           from Simmondsia chinensis, GI:4091810
          Length = 528

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -1

Query: 508 LGNSLTQYCFSLYTHTRHTVNNHKGSISDTECSCYFRREIN 386
           L N  +  C S Y    HTV  HKGS  D   +C ++RE N
Sbjct: 299 LSNRSSDRCRSKY-QLIHTVRTHKGS-DDNAFNCVYQREDN 337


>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
           factor family protein similar to to PRESSED FLOWER
           (GP:17907768) {Arabidopsis thaliana}
          Length = 199

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 124 SPTSITASQPSRTRWFPRPVSLLVRE 201
           S +  T+++P R+RW P+P  +L+ E
Sbjct: 20  SASGSTSAEPVRSRWSPKPEQILILE 45


>At4g11160.1 68417.m01808 translation initiation factor IF-2,
           mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
           Translation initiation factor IF-2, mitochondrial
           precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
          Length = 743

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = +3

Query: 114 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 206
           ++V+ HVDHGK++L D+L + +  +A   AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250


>At1g66310.1 68414.m07530 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 442

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +2

Query: 614 LTSL*PHITMMVVPWVRCLSTLARALLVSGLVFMGGLS 727
           LTSL P + ++V+ WV+  + LA  +L+SG + +  L+
Sbjct: 161 LTSL-PCVKVIVLEWVKFANDLALEMLISGCLVLESLT 197


>At3g28790.1 68416.m03593 expressed protein 
          Length = 608

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 25/68 (36%), Positives = 32/68 (47%)
 Frame = -2

Query: 489 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 310
           ST +  T TP T + +T APS T +A  TSE+ S       +   K  S  S  SG V  
Sbjct: 294 STPTPSTPTPSTPTPSTPAPS-TPAAGKTSEKGSESASMKKESNSKSES-ESAASGSVSK 351

Query: 309 TKSFSSSS 286
           TK  +  S
Sbjct: 352 TKETNKGS 359


>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
           to DNA repair by nucleotide excision (NER) RAD23
           protein, isoform II GI:1914685 from [Daucus carota]
          Length = 368

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2

Query: 510 ASAIA*RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 388
           AS+    ST    T T    STT  APS T+S AV +   +
Sbjct: 80  ASSAGPSSTQPTSTTTSTISSTTLAAPSTTQSIAVPASNST 120


>At1g12080.2 68414.m01397 expressed protein
          Length = 138

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 477 VCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 385
           V T TP  +    +A  VT + AV  EEK T
Sbjct: 85  VITETPVVEEEEKKAEEVTETPAVVEEEKKT 115


>At1g12080.1 68414.m01396 expressed protein
          Length = 104

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 477 VCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 385
           V T TP  +    +A  VT + AV  EEK T
Sbjct: 51  VITETPVVEEEEKKAEEVTETPAVVEEEKKT 81


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,225,644
Number of Sequences: 28952
Number of extensions: 330150
Number of successful extensions: 1045
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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