Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0050
(627 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46180.1 68415.m05742 intracellular protein transport protein... 34 0.067
At5g41220.1 68418.m05009 glutathione S-transferase, putative sim... 33 0.21
At1g66170.1 68414.m07511 PHD finger family protein (MMD1) contai... 32 0.36
At5g44610.1 68418.m05466 DREPP plasma membrane polypeptide-relat... 31 0.47
At3g61390.2 68416.m06872 U-box domain-containing protein several... 31 0.47
At2g30780.1 68415.m03753 pentatricopeptide (PPR) repeat-containi... 31 0.47
At5g65910.1 68418.m08296 BSD domain-containing protein contains ... 31 0.63
At5g60800.1 68418.m07628 heavy-metal-associated domain-containin... 31 0.63
At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5) iden... 31 0.63
At3g05110.1 68416.m00555 hypothetical protein 31 0.63
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 30 1.1
At2g36340.1 68415.m04460 DNA-binding storekeeper protein-related... 30 1.1
At1g06230.2 68414.m00659 DNA-binding bromodomain-containing prot... 30 1.1
At1g06230.1 68414.m00658 DNA-binding bromodomain-containing prot... 30 1.1
At1g27850.1 68414.m03413 expressed protein similar to En/Spm-lik... 30 1.4
At5g54050.1 68418.m06722 DC1 domain-containing protein 29 1.9
At5g29624.1 68418.m03640 DC1 domain-containing protein contains ... 29 1.9
At1g50750.1 68414.m05707 expressed protein 29 1.9
At1g04730.1 68414.m00469 AAA-type ATPase family protein contains... 29 1.9
At4g27595.1 68417.m03964 protein transport protein-related low s... 29 2.5
At5g41020.1 68418.m04986 myb family transcription factor contain... 29 3.3
At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identic... 29 3.3
At3g57390.2 68416.m06389 MADS-box protein (AGL18) agamous-like p... 29 3.3
At3g57390.1 68416.m06388 MADS-box protein (AGL18) agamous-like p... 29 3.3
At3g19860.1 68416.m02515 basic helix-loop-helix (bHLH) family pr... 29 3.3
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 28 4.4
At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein si... 28 4.4
At2g36740.1 68415.m04507 YL1 nuclear family protein similar to Y... 28 4.4
At1g23710.1 68414.m02993 expressed protein 28 4.4
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 28 4.4
At5g66150.1 68418.m08333 glycosyl hydrolase family 38 protein si... 28 5.8
At5g54670.1 68418.m06807 kinesin-like protein C (KATC) 28 5.8
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 28 5.8
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 28 5.8
At4g03430.1 68417.m00470 pre-mRNA splicing factor-related simila... 28 5.8
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 28 5.8
At1g51070.1 68414.m05741 basic helix-loop-helix (bHLH) family pr... 28 5.8
At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH) domain... 27 7.7
At5g54030.1 68418.m06720 DC1 domain-containing protein contains ... 27 7.7
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 27 7.7
At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG ... 27 7.7
At2g46250.1 68415.m05751 myosin heavy chain-related contains wea... 27 7.7
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 34.3 bits (75), Expect = 0.067
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 61 SEQELIDQANTIKDIDNSLRANKKEVVDIPVKVI-VEEIKPSLKSDLENVEVPDENEEIK 237
++++ + + +KD+D L ++KKE +I KV+ E I K+ + VE D+N +++
Sbjct: 493 AKEDAMKLSARLKDVDEQLESSKKEKEEITSKVLHAENIAAEWKNRVSKVE--DDNAKVR 550
Query: 238 RPL 246
R L
Sbjct: 551 RVL 553
>At5g41220.1 68418.m05009 glutathione S-transferase, putative
similar to emb|CAA10662
Length = 590
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 DKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLENV 207
D+ + N S +D+ + D+ ++++K++ + + +EE + S LEN+
Sbjct: 417 DRVYSSSSNPESVPIALDEEEQVMDLPLGVKSSKQKEKKVATIITIEEREADSGSRLENL 476
Query: 208 EVPDENEEI-KRPL 246
V DE E++ RPL
Sbjct: 477 WVLDEEEQVMDRPL 490
>At1g66170.1 68414.m07511 PHD finger family protein (MMD1) contains
Pfam profile: PF00628: PHD-finger
Length = 704
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 464 CCKLAWSSLICSVRAYHFPIPSDTSW 387
C WS+ S R YHF IP DT W
Sbjct: 95 CRCTGWSNHFVSKRKYHFIIPIDTEW 120
>At5g44610.1 68418.m05466 DREPP plasma membrane polypeptide-related
contains Pfam profile: PF05558 DREPP plasma membrane
polypeptide
Length = 168
Score = 31.5 bits (68), Expect = 0.47
Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +1
Query: 19 EAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDL 198
E E KP ++ E E++++ + + + V++PV EE KP+++ +
Sbjct: 50 EGETKPEEIIATGEKEIEIVEE-----------KKEEAKPVEVPVLAAAEEKKPAVEEEK 98
Query: 199 ENVEVPDEN---EEIKRPLVDLRNPGPPQHQE 285
+ V ++ EE K+P V+ + P + +E
Sbjct: 99 KTAPVEEKKPAVEEEKKPAVEEKKPVEEEKKE 130
>At3g61390.2 68416.m06872 U-box domain-containing protein several
hypothetical proteins - Arabidopsis thaliana
Length = 435
Score = 31.5 bits (68), Expect = 0.47
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 211 VPDENEEIKRPLVDLRN-PGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGF 387
+ +E EE+K L ++ G + +E T N H E + + + +DI GF
Sbjct: 319 IREEQEELKIKLREVSKLKGKREEEEASTSN--HREPPQYFICPITHDIMEDPHVAADGF 376
Query: 388 QEVSDGIGKWYARTEQINEL 447
+ I +W+ R + + +
Sbjct: 377 TYEGEAISRWFERGHETSPM 396
>At2g30780.1 68415.m03753 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 452
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 292 TQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYART 429
T P HH D + VS +K+++ T + ++ FQ V D G+W RT
Sbjct: 20 TSLPAHHTDLVQRVSILKDELLTIGNS-KEKFQNVLDQKGQWLFRT 64
>At5g65910.1 68418.m08296 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 432
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +1
Query: 253 LRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGI 408
L P + Q P+H E+ E +++ +KND R G ++S +
Sbjct: 64 LSQPSSSPDLQERNQTPDHPEEDEDLIAGIKNDFAEIGGRFRTGISKLSGNL 115
>At5g60800.1 68418.m07628 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 283
Score = 31.1 bits (67), Expect = 0.63
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1
Query: 175 KPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDI 354
K ++ L+ V++ ++ EE + VDL +P P + +E E +N ++ ED +K K D
Sbjct: 64 KLTVTGALDPVKLREKLEEKTKKKVDLVSPQPKKEKEKENKN-KNDEDKKKSEEKKKPDN 122
Query: 355 N 357
N
Sbjct: 123 N 123
>At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5)
identical to HAC5 (GI:21105780) [Arabidopsis thaliana];
similar to CREB-binding protein GB:S39162 from [Homo
sapiens]
Length = 1670
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 370 ALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNE 507
+L G Q VS G+G+W++ ++ + + + +E+FG + K +E
Sbjct: 524 SLSAGVQPVS-GLGQWHSSSQNLTPISKNSNEEREHFGVRFHKQHE 568
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 31.1 bits (67), Expect = 0.63
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 19/157 (12%)
Frame = +1
Query: 49 ENLSSEQELIDQA-NTIKDIDNSLRA--NKKEVVDIPVKVIVEEIKP-SLKS-DLENVEV 213
E + E ELI+ + ++ +N LR K++ D+ K + E+ K LK ++ +
Sbjct: 53 ERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELEEKEKELELKQRQVQERSI 112
Query: 214 PDENEEIKRPLVDLRNPGPPQHQEHET----------QNPEHHEDAEKIVSSVKNDINTA 363
D PL RN ++ +N E HE +V S ND
Sbjct: 113 QDGPSVDAEPLTQQRNHNDEDKEKDSASVLSASVQIIENDEDHEPVMCVVDSEFNDFRKT 172
Query: 364 EIALRQG----FQEVSDGIGKWYARTEQINELQASLQ 462
+ G + D + + Y R +++N+ Q+SLQ
Sbjct: 173 MSSFMAGQVWALYDGIDSMPRCYGRIKKVNKCQSSLQ 209
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 30.3 bits (65), Expect = 1.1
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +1
Query: 64 EQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLE--NVEVPDENEEIK 237
E+ ++D+ I + +K+ +++ + + IK K+ +E N + EN+ +
Sbjct: 481 EKTVLDEKERFTQIQWDMEELRKQCMEM--ESFLNSIKDE-KTHIETANESLVQENQMLL 537
Query: 238 RPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKW 417
+ + D+R H+EHE + + + +V VK+ + T + LR QE+S GI K
Sbjct: 538 QQINDIRENFENFHKEHEELEVKAKAELKVLVKEVKS-LRTTQSDLR---QELS-GIMKE 592
Query: 418 YARTEQINELQASLQHFQEN 477
E+I + + + +N
Sbjct: 593 KLEMERIVQREKDREETAKN 612
>At2g36340.1 68415.m04460 DNA-binding storekeeper protein-related
contains similarity to storekeeper protein [Solanum
tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
Protein of unknown function, DUF573
Length = 414
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +1
Query: 1 IPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKP 180
+P PE D P ++ E ++AN +IDN +R + D+P E P
Sbjct: 171 VPSGEPETNDVPCEEQDDRDVPCEEQERANI--EIDNGVREKLDQAKDVPCVEQESEDVP 228
Query: 181 SLKSDLENVEVPDENEE 231
++ + ++E+ + +E
Sbjct: 229 CVEQERVSIEIDNGEKE 245
>At1g06230.2 68414.m00659 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 766
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/116 (17%), Positives = 49/116 (42%)
Frame = +1
Query: 22 AEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLE 201
A +KP ++EN + ++ + ++ + K + + + K ++ E
Sbjct: 43 AIEKPEGLLENENDNNDVSPAETLAPEFEDPIVVVKNSIEEAALGTNSHGDKNLTEAPSE 102
Query: 202 NVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEI 369
N+ D ++ I +PLV+ + PQ + + E+ + ++D+NT +
Sbjct: 103 NLPGDDSDKVIDKPLVEAFSQAQPQ-DDASLAAMDKSEEVPSQIPKAQDDVNTVVV 157
>At1g06230.1 68414.m00658 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 766
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/116 (17%), Positives = 49/116 (42%)
Frame = +1
Query: 22 AEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLE 201
A +KP ++EN + ++ + ++ + K + + + K ++ E
Sbjct: 43 AIEKPEGLLENENDNNDVSPAETLAPEFEDPIVVVKNSIEEAALGTNSHGDKNLTEAPSE 102
Query: 202 NVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEI 369
N+ D ++ I +PLV+ + PQ + + E+ + ++D+NT +
Sbjct: 103 NLPGDDSDKVIDKPLVEAFSQAQPQ-DDASLAAMDKSEEVPSQIPKAQDDVNTVVV 157
>At1g27850.1 68414.m03413 expressed protein similar to En/Spm-like
transposon protein GB:AAB95292 GI:2088658 from
[Arabidopsis thaliana]
Length = 1148
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 178 PSLKSDLENVEVPDENEE-IKRPLVDLRNPGPPQHQEHETQNPEHHEDAEK 327
P +S++EN+ PD++EE I +V+L N +H+ HE+ + D ++
Sbjct: 447 PVFQSEVENLAYPDKHEESIAFGMVNLSNES-SRHESHESSFSDQLGDMDQ 496
>At5g54050.1 68418.m06722 DC1 domain-containing protein
Length = 580
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 175 KPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHE 291
K + LE +VP+E EEIK P + G H HE
Sbjct: 265 KKEVWDGLELEDVPEEEEEIKDPFKVINEKGDIVHFSHE 303
>At5g29624.1 68418.m03640 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain
Length = 488
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 193 DLENVEVPDENEEIKRPLVDLRNPGPPQHQEHE 291
DLE +VPDE EEIK P + G H HE
Sbjct: 261 DLE--DVPDEEEEIKDPFKVINENGDIVHISHE 291
>At1g50750.1 68414.m05707 expressed protein
Length = 816
Score = 29.5 bits (63), Expect = 1.9
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Frame = +1
Query: 157 VIVEEIKPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVS 336
+ VEE PS L + E E E++ + N P HQ+H T+ E + S
Sbjct: 653 IAVEE--PSSDEKLCSSEA--EKEDVVADDDTMNNIEPVPHQQHATRGTNRDETSRACKS 708
Query: 337 SV--KNDINTAEIALRQGFQEVSDGI---GKWYARTEQINELQASLQHFQENFG 483
V D + +IA+ +G Q G+ G T + NE L+ + +FG
Sbjct: 709 VVLSPTDESNIQIAVGEGSQGQDCGLQDNGLGSDETSKSNEQLEDLEKRKNDFG 762
>At1g04730.1 68414.m00469 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 954
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 25 EDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSL-KSDLE 201
E + L+VV+ S + + I +ID +L + K VD+ +K+++ E K + K ++E
Sbjct: 388 ETRILDVVQMNSVTADSRPKCLVIDEIDGAL-GDGKGAVDVILKMVLAERKHATGKENVE 446
Query: 202 NVEVPDENEEIKRPL 246
NV+ + + PL
Sbjct: 447 NVKTSSKKDRRTAPL 461
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +1
Query: 97 KDIDNS--LRANKKEVVDIPVKVIVEEIKPSLKSDLENVEVPDENEEIKRPLVDLRNPGP 270
K ++ S L+ + E +D+ +K + E +++L N + ++ E + + R
Sbjct: 321 KQVEESKELKTSASESLDLAMKQLEENNHALHEAELGNATLKEKVESLVTTIG--RQEND 378
Query: 271 PQHQEHETQ-NPEHHEDAEKIVSSVKNDINTAE 366
+ +H+ + E EK+V S+K+D+ T +
Sbjct: 379 LEESQHQVCISKEETSKLEKLVESIKSDLETTQ 411
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +1
Query: 40 NVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLENVEVPD 219
+V+EN S + + K D L A +E +D VK + KPS+ SD+E++ +
Sbjct: 149 DVIENTESSKVSDKKKGKRKRDDTDLGA--EENIDKEVKRKNNKKKPSVDSDVEDINLDS 206
Query: 220 ENEEIKR 240
N+ K+
Sbjct: 207 TNDGKKK 213
>At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 486
Score = 28.7 bits (61), Expect = 3.3
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +1
Query: 34 PLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDI-PVKVIVEEIKPSLKSDLENVE 210
PL + +++ + QA ID+ N KE P KV VE+ + D
Sbjct: 155 PLPDMSHVAGKNRKELQAMAKGRIDDKKEQNMKEEYPFSPPKVKVEDTQKESFVDRSFGG 214
Query: 211 VPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVK 345
+ + LV+L N +Q+ E +PE+ DAE++++ ++
Sbjct: 215 KKPVSTSVNNSLVELSN----YNQKREEFDPEYDNDAEQLLAEME 255
>At3g57390.2 68416.m06389 MADS-box protein (AGL18) agamous-like
protein 15 - Arabidopsis thaliana, PIR:S71200
Length = 195
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +1
Query: 55 LSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLENV------EVP 216
+S E +L + +++KD + N+ E I K +EE L+ +E + +V
Sbjct: 71 ISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEE-NQILRKQVEMLGRGSGPKVL 129
Query: 217 DENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED 318
+E + P D P +E E N EHH D
Sbjct: 130 NERPQDSSPEAD---PESSSSEEDENDNEEHHSD 160
>At3g57390.1 68416.m06388 MADS-box protein (AGL18) agamous-like
protein 15 - Arabidopsis thaliana, PIR:S71200
Length = 256
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +1
Query: 55 LSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLENV------EVP 216
+S E +L + +++KD + N+ E I K +EE L+ +E + +V
Sbjct: 132 ISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEE-NQILRKQVEMLGRGSGPKVL 190
Query: 217 DENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED 318
+E + P D P +E E N EHH D
Sbjct: 191 NERPQDSSPEAD---PESSSSEEDENDNEEHHSD 221
>At3g19860.1 68416.m02515 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 284
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 28 DKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLENV 207
DK + + + +EL + N +K +L +E+ K + E K SLKSD+EN+
Sbjct: 40 DKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQ--EKNDLREEKTSLKSDIENL 97
Query: 208 EV 213
+
Sbjct: 98 NL 99
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 1 IPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKK 132
I + E + P +V ENL + ID ++KD+ +L KK
Sbjct: 405 IESLLKETKIAPADVAENLMKKNTEIDADGSLKDLIQALEGKKK 448
>At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GB:S12402 [Nicotiana sp],
GB:CAA03908 [Citrus sinensis], GB:S44364 [Lycopersicon
esculentum]
Length = 491
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 468 EMLQAGLELVNLLGTS-VPFSNTV*HFLEALTKSDFRCVNVIFDGRN 331
+++Q ++VN L + PF+ + FL SDF FDG+N
Sbjct: 189 DIIQEMTQIVNFLAQNKAPFTVNIYPFLSLYLSSDFPFEYAFFDGQN 235
>At2g36740.1 68415.m04507 YL1 nuclear family protein similar to YL-1
protein (Transcription factor-like 1)
(Swiss-Prot:Q15906) [Homo sapiens]
Length = 379
Score = 28.3 bits (60), Expect = 4.4
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = +1
Query: 109 NSLRANKKEVVDIPVKVIVEEIKPSLKSDLENVEVPDENEEI---KRPLVDLRNPGPPQH 279
+++ N+KE+ D+P K ++ K + K + +V + E I ++P +L N +
Sbjct: 89 DAVAVNEKELRDLPKKRLIYPGKTASKKKKKKTKVVSQLEYIPGDEKPGEELGNKEQEEK 148
Query: 280 QEHETQNPEHHEDAEKIVSSVKNDINTAE-IALRQGFQEVSDGI 408
+E+E Q E + + + AE ALR Q + I
Sbjct: 149 EENEAQEDMEGEKVIRKSTRTSVVVRQAERDALRAAIQATTKPI 192
>At1g23710.1 68414.m02993 expressed protein
Length = 295
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 148 PVKVIVEEIKPSLKSDLENVEVPDENEEIKR 240
PVK I +E + D + P+E+EEIK+
Sbjct: 10 PVKCIADERLTEISMDFTKLGFPEEDEEIKK 40
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 28.3 bits (60), Expect = 4.4
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Frame = +1
Query: 4 PDKVPEAEDKPLNVVENLSS--EQELIDQANT-IKDIDNSLRANKKEVVDIPVKVIVEEI 174
PDK K V + + E++ +Q + KD ++SL+ K+ + P ++ +
Sbjct: 722 PDKTRGRTGKKQKVTQAMHRKIEKDCDEQEDLETKDEEDSLKLGKESDAE-PDRMEDHQE 780
Query: 175 KPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDI 354
P ++E +E E K P + + G + E ET E H+ ++ + K+D
Sbjct: 781 LPE-NHNVETKTDGEEQEAAKEPTAESKTNGEEPNAEPETDGKE-HKSLKEPNAEPKSDG 838
Query: 355 NTAEIALRQGFQEVSDG 405
E A + +DG
Sbjct: 839 EEQEAAKEPNAELKTDG 855
>At5g66150.1 68418.m08333 glycosyl hydrolase family 38 protein
similar to lysosomal alpha-mannosidase SP:O09159 from
[Mus musculus]
Length = 1047
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 37 LNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLENVEVP 216
+N+ S+E+ L Q + I NSL N+ E++ IPV ++ S + L+ +P
Sbjct: 479 MNISYCPSTEETLPGQKSLILVAYNSLGWNRTEIIRIPVNDAGLSVEDSSGNTLDAQYIP 538
Query: 217 DEN 225
+N
Sbjct: 539 MDN 541
>At5g54670.1 68418.m06807 kinesin-like protein C (KATC)
Length = 754
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 KVPEAEDKPLNVVENLSSEQ-ELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSL 186
+V + D+ L V+ L +E + D + I +++ + + ++ + +++ E + +
Sbjct: 284 QVKDDRDRHLVEVKTLQTEATKYNDFKDAITELETTCSSQSTQIRQLQDRLVNSERRLQV 343
Query: 187 KSDLENVEVPDENEEIKRPLVDLRN 261
SDL E +E E+ K+ ++DL++
Sbjct: 344 -SDLSTFEKMNEYEDQKQSIIDLKS 367
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 343 KNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNET 510
KNDI+ A + R+ +EV I K + +++ + SL Q G + Q L ET
Sbjct: 411 KNDIHAAVESARRELEEVKANIEKAASEVKKLKIIAGSL---QSELGRERQDLEET 463
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +1
Query: 196 LENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIAL 375
++ E+ + ++ K+ L+DLRN E E+ EKI + + ++I TA L
Sbjct: 560 VKEAELNAQKDQEKKQLIDLRNSADTTIYSVEKSLSEYR---EKIPAEIASEIETAVSDL 616
Query: 376 RQGF--QEVSDGIGKWYARTEQINEL 447
R ++V D K A + ++++
Sbjct: 617 RTAMAGEDVEDIKAKVEAANKAVSKI 642
>At4g03430.1 68417.m00470 pre-mRNA splicing factor-related similar
to pre-mRNA splicing factor pre-mRNA splicing factor
prp1 (SP:Q12381) [Fission yeast]
Length = 1029
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +1
Query: 334 SSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASL 459
+ +++D+ LR+G + + D + W A E NE A +
Sbjct: 458 AKLEHDVENKSRVLRKGLEHIPDSVRLWKAVVELANEEDARI 499
>At3g54670.1 68416.m06049 structural maintenance of chromosomes (SMC)
family protein similar to SMC1 protein [Bos taurus]
GI:4235253, 14S cohesin SMC1 subunit (SMC protein)
[Xenopus laevis] GI:3328231; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 27.9 bits (59), Expect = 5.8
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Frame = +1
Query: 1 IPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDID------NSLRANKKEVVDIPVKVI 162
I DK+P+ E + N++E + + + +A ++D N L E+VD K
Sbjct: 747 IKDKLPQLEQEERNIIEEIDRIKPELSKAIARTEVDKRKTEMNKLEKRMNEIVDRIYKDF 806
Query: 163 VEEI-KPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSS 339
+ + P+++ E ++ +E + L ++Q QN + KI SS
Sbjct: 807 SQSVGVPNIRV-YEETQLKTAEKEAEERLELSNQLAKLKYQLEYEQNRDVGSRIRKIESS 865
Query: 340 VKN 348
+ +
Sbjct: 866 ISS 868
>At1g51070.1 68414.m05741 basic helix-loop-helix (bHLH) family
protein similar to bHLH transcription factor GI:3757520
from [Arabidopsis thaliana]
Length = 226
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +1
Query: 4 PDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPS 183
P + P+ DK + + + + D+A +KD+++SL+ KE+ D K + + K
Sbjct: 95 PGRTPKT-DKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKD--EKNELRDEKQK 151
Query: 184 LKSDLENVE 210
LK + E ++
Sbjct: 152 LKVEKERID 160
>At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related low similarity to clathrin assembly
protein AP180 [Xenopus laevis] GI:6492344; contains Pfam
profile PF01417: ENTH domain
Length = 591
Score = 27.5 bits (58), Expect = 7.7
Identities = 26/111 (23%), Positives = 46/111 (41%)
Frame = +1
Query: 55 LSSEQELIDQANTIKDIDNSLRANKKEVVDIPVKVIVEEIKPSLKSDLENVEVPDENEEI 234
L++ +E I +A + L +KE + EE +P ++ EN +EN E
Sbjct: 299 LATMEEYIKEAPQSGSVQKKLEYQEKEEEEQEQ----EEEQPEEPAEEEN---QNENTEN 351
Query: 235 KRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGF 387
+PL++ P + E E P D + ++ + + AEI F
Sbjct: 352 DQPLIEEEEEEPKEEIEVEEAKPSPLIDTDDLLGLHEINPKAAEIEQNNAF 402
>At5g54030.1 68418.m06720 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 419
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 196 LENVEVPDENEEIKRPLVDLRNPGPPQHQEHE 291
LE +VP+E EEI+ P + + G H HE
Sbjct: 250 LELEDVPEEEEEIEDPFKVINDKGDIIHFSHE 281
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +1
Query: 49 ENLSSEQELIDQANTIKDIDNSLRA-----NKKEVVDIPVKVIVEEIKPSLKSDLENVEV 213
E + E+ + ++ N I + ++ N+ E+V I K ++EE++ L E V
Sbjct: 237 EKIGLEKIMEEKKNEIDGLKREIKVLLSEKNEMEIVKIEQKGVIEELERKLDKLNETVRS 296
Query: 214 PDENEEIKRPLV 249
+ E++ R LV
Sbjct: 297 LTKEEKVLRDLV 308
>At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG
binding domain-containing protein contains Pfam profiles
PF00628: PHD-finger (2 copies), PF01429: Methyl-CpG
binding domain
Length = 2176
Score = 27.5 bits (58), Expect = 7.7
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 175 KPSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHED-AEKIVSSVKND 351
K SLKSD NV+ + + V + G ++QE E+ +P H E+ K V+ N
Sbjct: 1847 KESLKSDYLNVKSSAGKDVAEISNVSELDSGLIRYQEEESISPYHFEEICSKFVTKDCNR 1906
Query: 352 INTAEIAL 375
EI L
Sbjct: 1907 DLVKEIGL 1914
>At2g46250.1 68415.m05751 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, muscle
(Swiss-Prot:P05661) [Drosophila melanogaster]
Length = 468
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +1
Query: 109 NSLRANKKEVVDIPVKVIVEEIKPSLKSDLENVEVPDENEEIKRPL-VDLRNPGPPQHQE 285
+ LRA + V + +V ++E++ L+ + + L + + + G H E
Sbjct: 350 SGLRAKPDDSVSMHQRVCLKELEEGLEKRTRRDNKLQLKKSSGQVLNLSMSSEGDKIHPE 409
Query: 286 HETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 381
+N + HE EK + KN + +R+
Sbjct: 410 SSPRNVDDHESQEKSRTFSKNHPRNVNVMIRE 441
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.307 0.127 0.343
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,230,767
Number of Sequences: 28952
Number of extensions: 213544
Number of successful extensions: 748
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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