Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0081
(553 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 134 4e-32
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 134 5e-32
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 134 5e-32
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 132 1e-31
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 132 2e-31
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 132 2e-31
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 132 2e-31
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 131 3e-31
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 131 3e-31
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 122 2e-28
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 122 2e-28
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 120 5e-28
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 83 2e-16
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 71 5e-13
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 68 4e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 59 2e-09
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 47 7e-06
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 46 1e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 45 3e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.073
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 29 2.1
At3g51650.1 68416.m05664 expressed protein 29 2.1
At3g51640.1 68416.m05663 expressed protein 29 2.1
At2g20270.1 68415.m02368 glutaredoxin family protein contains gl... 28 4.8
At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:4... 28 4.8
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 28 4.8
At2g18840.1 68415.m02194 integral membrane Yip1 family protein c... 27 6.3
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 27 8.3
At5g41460.1 68418.m05035 fringe-related protein strong similarit... 27 8.3
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.3
At3g61940.1 68416.m06956 zinc transporter, putative similar to z... 27 8.3
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 8.3
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 134 bits (324), Expect = 4e-32
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 427 PAMY 438
PAMY
Sbjct: 132 PAMY 135
Score = 128 bits (310), Expect = 2e-30
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 226
E++ LV DNG+GM KAGFAGDDAP AVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 227 GILTLKYPID 256
GILTLKYPI+
Sbjct: 65 GILTLKYPIE 74
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS S P YEGYA
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 134 bits (323), Expect = 5e-32
Identities = 58/64 (90%), Positives = 59/64 (92%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 427 PAMY 438
PAMY
Sbjct: 132 PAMY 135
Score = 128 bits (310), Expect = 2e-30
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 226
E++ LV DNG+GM KAGFAGDDAP AVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 227 GILTLKYPID 256
GILTLKYPI+
Sbjct: 65 GILTLKYPIE 74
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS S P YEGYA
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 134 bits (323), Expect = 5e-32
Identities = 58/64 (90%), Positives = 59/64 (92%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 427 PAMY 438
PAMY
Sbjct: 132 PAMY 135
Score = 128 bits (310), Expect = 2e-30
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 226
E++ LV DNG+GM KAGFAGDDAP AVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 227 GILTLKYPID 256
GILTLKYPI+
Sbjct: 65 GILTLKYPIE 74
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS S P YEGYA
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 132 bits (319), Expect = 1e-31
Identities = 57/64 (89%), Positives = 59/64 (92%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFN
Sbjct: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNV 131
Query: 427 PAMY 438
PAMY
Sbjct: 132 PAMY 135
Score = 128 bits (310), Expect = 2e-30
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 226
E++ LV DNG+GM KAGFAGDDAP AVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 227 GILTLKYPID 256
GILTLKYPI+
Sbjct: 65 GILTLKYPIE 74
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS S P YEGYA
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 132 bits (318), Expect = 2e-31
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 427 PAMY 438
PAMY
Sbjct: 132 PAMY 135
Score = 124 bits (299), Expect = 4e-29
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 226
+++ +V DNG+GM KAGFAGDDAP AVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 227 GILTLKYPID 256
GILTLKYPI+
Sbjct: 65 GILTLKYPIE 74
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS S P YEG++
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGFS 172
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 132 bits (318), Expect = 2e-31
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 427 PAMY 438
PAMY
Sbjct: 132 PAMY 135
Score = 124 bits (299), Expect = 4e-29
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 226
+++ +V DNG+GM KAGFAGDDAP AVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 227 GILTLKYPID 256
GILTLKYPI+
Sbjct: 65 GILTLKYPIE 74
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS S P YEG++
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGFS 172
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 132 bits (318), Expect = 2e-31
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 427 PAMY 438
PAMY
Sbjct: 132 PAMY 135
Score = 124 bits (299), Expect = 4e-29
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 226
+++ +V DNG+GM KAGFAGDDAP AVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 227 GILTLKYPID 256
GILTLKYPI+
Sbjct: 65 GILTLKYPIE 74
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS S P YEG++
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGFS 172
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 131 bits (317), Expect = 3e-31
Identities = 56/64 (87%), Positives = 58/64 (90%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEA LNPKANREKMT IMF+TFN
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNA 131
Query: 427 PAMY 438
PAMY
Sbjct: 132 PAMY 135
Score = 128 bits (310), Expect = 2e-30
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 226
E++ LV DNG+GM KAGFAGDDAP AVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 227 GILTLKYPID 256
GILTLKYPI+
Sbjct: 65 GILTLKYPIE 74
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS S P YEGYA
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 131 bits (317), Expect = 3e-31
Identities = 56/64 (87%), Positives = 58/64 (90%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEA LNPKANREKMT IMF+TFN
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNA 131
Query: 427 PAMY 438
PAMY
Sbjct: 132 PAMY 135
Score = 128 bits (310), Expect = 2e-30
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 226
E++ LV DNG+GM KAGFAGDDAP AVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 227 GILTLKYPID 256
GILTLKYPI+
Sbjct: 65 GILTLKYPIE 74
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS S P YEGYA
Sbjct: 141 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 172
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 122 bits (294), Expect = 2e-28
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEA LNPKA+REKMT IMF+TF
Sbjct: 27 PMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFAV 86
Query: 427 PAMYGG 444
P+MY G
Sbjct: 87 PSMYIG 92
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +2
Query: 170 MVGMGQKDSYVGDEAQSKRGILTLKYPID 256
MVGM + D +VGD+A+++ GILTL YP++
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPME 29
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = +3
Query: 459 LSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
LSL+ASGRTTG VLDS S P YEG A
Sbjct: 97 LSLHASGRTTGTVLDSGDGVSYIVPIYEGSA 127
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 122 bits (293), Expect = 2e-28
Identities = 52/64 (81%), Positives = 56/64 (87%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEA NPKANREKMT IMF++F+
Sbjct: 61 PMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDV 120
Query: 427 PAMY 438
PAMY
Sbjct: 121 PAMY 124
Score = 70.9 bits (166), Expect = 5e-13
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +2
Query: 62 LVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 241
+V D G GM +AGFAGD+AP VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 242 KYPID 256
K P++
Sbjct: 59 KDPME 63
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VL LY+SGRTTG+VLD S P YEGYA
Sbjct: 130 VLYLYSSGRTTGVVLDLGERVSHTVPVYEGYA 161
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 120 bits (290), Expect = 5e-28
Identities = 50/66 (75%), Positives = 57/66 (86%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEA LNPK NREKMT IMF++F
Sbjct: 73 PIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAF 132
Query: 427 PAMYGG 444
P+MY G
Sbjct: 133 PSMYIG 138
Score = 119 bits (286), Expect = 1e-27
Identities = 52/70 (74%), Positives = 64/70 (91%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 226
+E A+V DNG+GM KAGFAGDDAP AVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 227 GILTLKYPID 256
GIL+LKYPI+
Sbjct: 66 GILSLKYPIE 75
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLY+SGRTTGIVLDS S P YEGYA
Sbjct: 142 VLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYA 173
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +1
Query: 214 TEQKRYPDPQIPHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREK 393
+E + D P +GIV NWDDME +W H FYNEL++ P + +LLT+ LNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 394 MTHIMFQTFNTPAMY 438
M MF+ +N ++
Sbjct: 120 MIETMFEKYNFAGVF 134
Score = 56.8 bits (131), Expect = 9e-09
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 LVVDNGSGMCKAGFAGDDAPCAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 235
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 236 TLKYPI 253
+ YP+
Sbjct: 67 DINYPV 72
Score = 30.3 bits (65), Expect = 0.89
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VL+LYA G TG+V+DS + P +GY+
Sbjct: 140 VLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYS 171
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 70.9 bits (166), Expect = 5e-13
Identities = 30/64 (46%), Positives = 39/64 (60%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HG V +WD ME+ W +N LR PE+H LLTE+ L P +RE I+F+TFN
Sbjct: 89 PIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFETFNV 148
Query: 427 PAMY 438
P +Y
Sbjct: 149 PGLY 152
Score = 40.7 bits (91), Expect = 6e-04
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 59 ALVVDNGSGMCKAGFAGDDAPCAVFPSIV 145
A+V+DNG+G K GFAG+ PC + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 68.1 bits (159), Expect = 4e-12
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P + GIV++WD ++ IW H F + L + P EHP+LL E LN + REK +MF+ +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 427 PAMY 438
PA++
Sbjct: 154 PALF 157
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVG 148
+EV+A+VVD GS CKAG+AG+DAP AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 453 PVLSLYASGRTTGIVLDSRTVSSTPCPFYEGY 548
PVL+ +A+GR T +V+D S+T P ++GY
Sbjct: 162 PVLTSFATGRATSLVVDCGGGSTTISPVHDGY 193
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 58.8 bits (136), Expect = 2e-09
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREK 393
P + GIVT+WD ++ +W H F N L + P EHP+LL E LN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 56.8 bits (131), Expect = 9e-09
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMV---GMGQKDSYVGDEAQ 217
+EV+A+VVD GS CKAG+AG+DAP AVFPS+VG G+ + +D+ D+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 218 SKRGILT 238
KR + T
Sbjct: 65 GKRKLYT 71
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 47.2 bits (107), Expect = 7e-06
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEASLNPKANREKMTHIMFQTFN 423
P G++ +WD ME + + Y L E +L T+ PKA RE++ +MF+TFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 424 TPAMYGGHPSPCS 462
Y + S
Sbjct: 117 VSGFYASEQAVLS 129
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 59 ALVVDNGSGMCKAGFA-GDDAPCAVFPSIVGR 151
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P G + N D +IW H F + L +AP +LLTEA L+ + + ++F+ F
Sbjct: 64 PIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGF 123
Query: 427 PAMYGGHP 450
++Y HP
Sbjct: 124 SSLYIAHP 131
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 62 LVVDNGSGMCKAGFAGDDAPCAVFPSIVGRP 154
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 238 PQIPHRHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEASLNPKANREKMTHIMFQ 414
P+ P +V ++ ME I + F + +HP+L+TE + NP +R KM ++F+
Sbjct: 82 PRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFE 141
Query: 415 TFNTPAMYGG 444
T+ PA+ G
Sbjct: 142 TYGVPAVAFG 151
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +2
Query: 62 LVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGD 208
+V+DNG+ + G+AG+ P VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.073
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 183 PIPTITP*WRGLPTIEGNTAQGASSPAKPALHIPEPLSTTNAATSS 46
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 442 GHPSPCSRCTRPVVPPVSCWTP 507
GH +P +RP +P V+CW P
Sbjct: 1370 GHTAPQMLPSRPDIPTVNCWRP 1391
>At3g51650.1 68416.m05664 expressed protein
Length = 826
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +3
Query: 336 GTPSPAH*GFPQPQGQQREDDPYHVPNIQHARHVRWPSKPVLSLYASGRTTGI 494
G P FPQP +R +DP +VP+ + P L L A+G TGI
Sbjct: 563 GFSPPTEFVFPQPGEDERFEDPCYVPD---PISLLGPVSESLDLRAAGYETGI 612
>At3g51640.1 68416.m05663 expressed protein
Length = 826
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +3
Query: 336 GTPSPAH*GFPQPQGQQREDDPYHVPNIQHARHVRWPSKPVLSLYASGRTTGI 494
G P FPQP +R +DP +VP+ + P L L A+G TGI
Sbjct: 563 GFSPPTELVFPQPGEDERFEDPCYVPD---PISLLGPVSESLDLRAAGYETGI 612
>At2g20270.1 68415.m02368 glutaredoxin family protein contains
glutaredoxin domain, Pfam:PF00462
Length = 179
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 454 PCSRCTRPVVPPVSCWTPGRCLPHRAHSTKDT 549
P RC +P V ++ W P RC +A S+ +
Sbjct: 37 PFRRCLKPTVIGIASWPPLRCSSVKAMSSSSS 68
>At1g54560.1 68414.m06222 myosin, putative similar to myosin
GI:433663 from [Arabidopsis thaliana]
Length = 1529
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 271 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
+W +E + + + + P LL EA + PK+ E + ++QTF T
Sbjct: 483 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKT 534
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 271 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
+W +E + + + + P LL EA + PK+ E + ++QTF T
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKT 539
>At2g18840.1 68415.m02194 integral membrane Yip1 family protein
contains Pfam domain, PF04893: Yip1 domain
Length = 281
Score = 27.5 bits (58), Expect = 6.3
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -2
Query: 279 IPVSDDSVSMGYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPTIEGNTAQGASSPAK 100
IPVS S S +++ +P L +SS + P+P P + QGAS+
Sbjct: 48 IPVSSSSSSSPFMQSNLPPLHPSSSAQKVTHVPVPPPLP-----AVSNSSNFQGASAFGS 102
Query: 99 PALHIPEPLSTT 64
P + EP+ T
Sbjct: 103 PPNTLTEPVWDT 114
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 27.1 bits (57), Expect = 8.3
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 355 TEASLNPKANREKMTHIMFQTFNTPAMYGGHPSPCSRC--TRPV--VPPVSCWTPGRCLP 522
T SL+ N + + +I ++F+T GGH RC T PV V P + T +P
Sbjct: 399 TNTSLSSSHNGDHVCNICHKSFSTGQALGGH----KRCHWTAPVSTVAPTTVPTAAPTVP 454
Query: 523 HRAHSTKDT 549
A S++ T
Sbjct: 455 ATASSSQVT 463
>At5g41460.1 68418.m05035 fringe-related protein strong similarity
to unknown protein (pir||T13026) similarity to predicted
proteins + similar to hypothetical protein GB:AAC23643
[Arabidopsis thaliana] + weak similarity to Fringe
[Schistocerca gregaria](GI:6573138);Fringe encodes an
extracellular protein that regulates Notch signalling.
Length = 524
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 426 ARHVRWPSKPVLSLYASGRTTGIVLDSRTVSSTPC 530
AR + PS+ L+ Y T ++R VS PC
Sbjct: 397 AREIEMPSRTFLNWYRRADYTAYAFNTRPVSRHPC 431
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 159 WRGLPTIEGNTAQGASSPAKPALHIPEPLSTTNAATSSSHI 37
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g61940.1 68416.m06956 zinc transporter, putative similar to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; similar to zinc transporter
ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member
of the cation diffusion facilitator (CDF) family, or
cation efflux (CE) family, PMID:11500563
Length = 334
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 256 VDGVFEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRG-EHGARS 116
VDG F +F L + + V+L H H G SHD G +G R+
Sbjct: 133 VDGFFMVLVAAFGLVVNIIMIVVLGHDHGHGHDHGHSHDHGHSYGERA 180
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 271 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTF 420
NW +E + + + + P LL EA + PK+ E M+QT+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,750,121
Number of Sequences: 28952
Number of extensions: 363708
Number of successful extensions: 1109
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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