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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0070
         (574 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor...    35   0.034
At4g23980.1 68417.m03447 auxin-responsive factor (ARF9) contains...    33   0.18 
At1g22275.1 68414.m02784 expressed protein                             32   0.31 
At1g73200.1 68414.m08471 expressed protein                             31   0.72 
At5g35200.1 68418.m04171 epsin N-terminal homology (ENTH) domain...    30   0.95 
At1g61400.1 68414.m06919 S-locus protein kinase, putative simila...    30   1.3  
At1g55350.4 68414.m06326 calpain-type cysteine protease family i...    30   1.3  
At1g55350.3 68414.m06325 calpain-type cysteine protease family i...    30   1.3  
At1g55350.2 68414.m06324 calpain-type cysteine protease family i...    30   1.3  
At1g55350.1 68414.m06323 calpain-type cysteine protease family i...    30   1.3  
At4g11870.1 68417.m01888 hypothetical protein                          29   1.7  
At3g57660.1 68416.m06424 DNA-directed RNA polymerase family prot...    28   3.8  
At3g17270.1 68416.m02208 F-box family protein                          28   3.8  
At5g44345.1 68418.m05430 F-box family protein-related contains T...    28   5.1  
At5g17830.1 68418.m02090 hypothetical protein contains Pfam doma...    28   5.1  
At5g25580.1 68418.m03044 expressed protein                             27   6.7  
At3g48520.1 68416.m05296 cytochrome P450 family protein similar ...    27   6.7  
At5g04870.1 68418.m00510 calcium-dependent protein kinase isofor...    27   8.9  
At4g31900.1 68417.m04533 chromatin remodeling factor, putative s...    27   8.9  
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ...    27   8.9  
At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG ...    27   8.9  
At2g24050.1 68415.m02873 MIF4G domain-containing protein / MA3 d...    27   8.9  
At1g58190.1 68414.m06605 leucine-rich repeat family protein cont...    27   8.9  
At1g17130.1 68414.m02087 cell cycle control protein-related cont...    27   8.9  

>At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2
           (CPK2) identical to calcium-dependent protein kinase
           isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535;
           contains protein kinase domain, Pfam:PF00069; contains
           EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
           INTERPRO:IPR002048
          Length = 646

 Score = 35.1 bits (77), Expect = 0.034
 Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = -3

Query: 269 SSTGS-QAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAK 93
           SS G+ Q  K    +P  D+V  +P   +++  +     T P+  ++ ++E++P+ K  K
Sbjct: 36  SSHGNGQVSKEAASEPATDQVQNKPPEPITMPSSK----TNPETKLKPDLEIQPEEKKEK 91

Query: 92  VSVKDIPSRPSISEDPKKDVSKEKLKTEI 6
           V  ++   +  + E+ K++V  E+ K E+
Sbjct: 92  VLAEETKQK-VVPEESKQEVPPEESKREV 119


>At4g23980.1 68417.m03447 auxin-responsive factor (ARF9) contains
           Pfam profiles: PF02309 AUX/IAA family and PF02362: B3
           DNA binding domain
          Length = 638

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 21/79 (26%), Positives = 39/79 (49%)
 Frame = -3

Query: 260 GSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVK 81
           G   + S L  P++      P R +++ K T+D  ++PK  I + +  E K + A+ S K
Sbjct: 457 GIDLMSSSLAVPEEKTA---PMRPINISKPTMDSHSDPKSEISK-VSEEKKQEPAEGSPK 512

Query: 80  DIPSRPSISEDPKKDVSKE 24
           ++ S+ S S   +  V  +
Sbjct: 513 EVQSKQSSSTRSRTKVQMQ 531


>At1g22275.1 68414.m02784 expressed protein
          Length = 856

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
 Frame = -3

Query: 266 STGSQAVKSKLMQPKQDK--VFEEPSRIVSVDKATVDKVT-EPKKVIQRNIEVEPKVKDA 96
           S+G++ +  K+++ + DK  +  + S +      T+DK+  E K ++ +N E E  +   
Sbjct: 359 SSGNE-LSEKIVELQNDKESLISQLSGVRCSASQTIDKLEFEAKGLVLKNAETESVISKL 417

Query: 95  KVSVKDIPSRPSISEDPKKDVSKEKLKTEI 6
           K  +  +      SED KK++S +    EI
Sbjct: 418 KEEIDTLLESVRTSEDKKKELSIKLSSLEI 447


>At1g73200.1 68414.m08471 expressed protein
          Length = 779

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = -3

Query: 221 QDKVFEEPSRIVSVDKATVDKVTEPKKVIQR-NIEVEPKVKDAKVSVKDIPSRPSISEDP 45
           QD   +  +   +  K+  DK    +++ +  NI  +P++++  VS    PS  SI+   
Sbjct: 622 QDSTSDRENLEAAEAKSKADKPPTSEQMQKTVNIPQKPRIEEESVSADTAPSANSIALLV 681

Query: 44  KKDVSKEKLKTEI 6
           + D S E+LKT +
Sbjct: 682 ESDKSLEELKTPL 694


>At5g35200.1 68418.m04171 epsin N-terminal homology (ENTH)
           domain-containing protein contains Pfam PF01417: ENTH
           domain. ENTH (Epsin N-terminal homology) domain; similar
           to clathrin assembly protein short form, Rattus
           norvegicus, EMBL:AF041373;similar to Chain A, Calm-N
           N-Terminal Domain Of Clathrin Assembly Lymphoid Myeloid
           Leukaemia Protein, Pi(4,5)p2 Complex (GP:13399999) {Homo
           sapiens}
          Length = 544

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = -3

Query: 242 SKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRP 63
           +  +Q  ++ V E P       +  V+K+T PK+++    E+ PKV      V++ P+ P
Sbjct: 290 TSFLQAMEEYVKEAPLAAGVKKEQVVEKLTAPKEILAIEYEIPPKV------VEEKPASP 343

Query: 62  S-ISEDPKKDVSKE 24
             +  + +K V K+
Sbjct: 344 EPVKAEAEKPVEKQ 357


>At1g61400.1 68414.m06919 S-locus protein kinase, putative similar
           to KI domain interacting kinase 1 [Zea mays]
           gi|2735017|gb|AAB93834; contains S-locus glycoprotein
           family domain, Pfam:PF00954
          Length = 821

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 207 KHLVLLWLHQFTFHRLAPCTTAIPASTGAAITATSPIFAAFFISTN 344
           K +VLLWL  F     A  T   P S G  +++++ ++   F S N
Sbjct: 18  KRVVLLWLSIFISFSSAEITEESPLSIGQTLSSSNGVYELGFFSFN 63


>At1g55350.4 68414.m06326 calpain-type cysteine protease family
           identical to calpain-like protein GI:20268660 from
           [Arabidopsis thaliana]; contains Pfam profiles: PF00648
           Calpain family cysteine protease, PF01067 Calpain large
           subunit,domain III; identical to cDNA calpain-like
           protein GI:20268659
          Length = 2151

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
 Frame = +1

Query: 151 SVTLSTVALSTDTILLGSSNTLSCFG-CINLL--------FTAWLPVLLPYQRVQELRSQ 303
           SV LS   LS  ++LLG S T+     C+++         +  W+P L    + ++LRS 
Sbjct: 698 SVGLSLSFLSKSSVLLGISLTVPLMAACLSIAVPIWMHNGYQFWVPQLSCGDQARDLRSP 757

Query: 304 RLAQFLQLSLYLPIYLF*GS-FNWPVLMSINPI 399
           R+  F+   L++ + LF GS  +   ++S  P+
Sbjct: 758 RIKGFI---LWICVVLFAGSVISLGAIISAKPL 787


>At1g55350.3 68414.m06325 calpain-type cysteine protease family
           identical to calpain-like protein GI:20268660 from
           [Arabidopsis thaliana]; contains Pfam profiles: PF00648
           Calpain family cysteine protease, PF01067 Calpain large
           subunit,domain III; identical to cDNA calpain-like
           protein GI:20268659
          Length = 2151

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
 Frame = +1

Query: 151 SVTLSTVALSTDTILLGSSNTLSCFG-CINLL--------FTAWLPVLLPYQRVQELRSQ 303
           SV LS   LS  ++LLG S T+     C+++         +  W+P L    + ++LRS 
Sbjct: 698 SVGLSLSFLSKSSVLLGISLTVPLMAACLSIAVPIWMHNGYQFWVPQLSCGDQARDLRSP 757

Query: 304 RLAQFLQLSLYLPIYLF*GS-FNWPVLMSINPI 399
           R+  F+   L++ + LF GS  +   ++S  P+
Sbjct: 758 RIKGFI---LWICVVLFAGSVISLGAIISAKPL 787


>At1g55350.2 68414.m06324 calpain-type cysteine protease family
           identical to calpain-like protein GI:20268660 from
           [Arabidopsis thaliana]; contains Pfam profiles: PF00648
           Calpain family cysteine protease, PF01067 Calpain large
           subunit,domain III; identical to cDNA calpain-like
           protein GI:20268659
          Length = 2151

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
 Frame = +1

Query: 151 SVTLSTVALSTDTILLGSSNTLSCFG-CINLL--------FTAWLPVLLPYQRVQELRSQ 303
           SV LS   LS  ++LLG S T+     C+++         +  W+P L    + ++LRS 
Sbjct: 698 SVGLSLSFLSKSSVLLGISLTVPLMAACLSIAVPIWMHNGYQFWVPQLSCGDQARDLRSP 757

Query: 304 RLAQFLQLSLYLPIYLF*GS-FNWPVLMSINPI 399
           R+  F+   L++ + LF GS  +   ++S  P+
Sbjct: 758 RIKGFI---LWICVVLFAGSVISLGAIISAKPL 787


>At1g55350.1 68414.m06323 calpain-type cysteine protease family
           identical to calpain-like protein GI:20268660 from
           [Arabidopsis thaliana]; contains Pfam profiles: PF00648
           Calpain family cysteine protease, PF01067 Calpain large
           subunit,domain III; identical to cDNA calpain-like
           protein GI:20268659
          Length = 2151

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
 Frame = +1

Query: 151 SVTLSTVALSTDTILLGSSNTLSCFG-CINLL--------FTAWLPVLLPYQRVQELRSQ 303
           SV LS   LS  ++LLG S T+     C+++         +  W+P L    + ++LRS 
Sbjct: 698 SVGLSLSFLSKSSVLLGISLTVPLMAACLSIAVPIWMHNGYQFWVPQLSCGDQARDLRSP 757

Query: 304 RLAQFLQLSLYLPIYLF*GS-FNWPVLMSINPI 399
           R+  F+   L++ + LF GS  +   ++S  P+
Sbjct: 758 RIKGFI---LWICVVLFAGSVISLGAIISAKPL 787


>At4g11870.1 68417.m01888 hypothetical protein 
          Length = 74

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 252 LAPCTTAIPASTGAAITATSPIFAAFFISTNLPVL 356
           + P TT +PA T A  T T+P  A   ++   P +
Sbjct: 39  VTPTTTVVPAITSATTTVTAPTMAVTPVTMGTPTM 73


>At3g57660.1 68416.m06424 DNA-directed RNA polymerase family protein
            similar to SP|O35134 DNA-directed RNA polymerase I
            largest subunit (EC 2.7.7.6) (RNA polymerase I 194 kDa
            subunit) (RPA194) {Mus musculus}; contains InterPro
            accession IPR000722: RNA polymerase, alpha subunit
          Length = 1670

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 22/80 (27%), Positives = 39/80 (48%)
 Frame = -3

Query: 260  GSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVK 81
            GS A K K  Q   +  +EE S   + + +++  V +P        E++ + +D +VS +
Sbjct: 1354 GSDAQKQK-KQETDEMDYEENSEDETNEPSSISGVEDP--------EMDSENEDTEVSKE 1404

Query: 80   DIPSRPSISEDPKKDVSKEK 21
            D P     S +P+K+V   K
Sbjct: 1405 DTPEPQEESMEPQKEVKGVK 1424


>At3g17270.1 68416.m02208 F-box family protein
          Length = 134

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = -3

Query: 296 RSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRI--VSVDKATVDKVTEPKKVIQRNI 123
           ++ C RWY      + VK  L +  ++ +     R+  +SV++  +D   EP       +
Sbjct: 28  KTICKRWYALFRDPRFVKKNLCKSAREVMLLMNDRVHSISVNRHGIDDRFEPSMEFSGKL 87

Query: 122 EVEPKVKDAKVS 87
                 KD KVS
Sbjct: 88  RSLIDSKDVKVS 99


>At5g44345.1 68418.m05430 F-box family protein-related contains
           TIGRFAM TIGR01640 : F-box protein interaction domain
          Length = 181

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +3

Query: 33  DIFLRILGYARPRRNILNTYFSIFHFWFYFNITLNYFFRL 152
           D +LR++G  +    +L T +++  + FY+N+      RL
Sbjct: 133 DAYLRLVGVTQRNEIVLATCYAVPFYLFYYNMERKTIIRL 172


>At5g17830.1 68418.m02090 hypothetical protein contains Pfam domain,
           PF04515: Protein of unknown function, DUF580
          Length = 474

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 231 HQFTFHRLAPCTTAIPASTGAAITATSPIFAAFF 332
           H+FTF  ++  T  +PA T  AI   S I + F+
Sbjct: 175 HEFTFQTMSTATGILPART-RAIAVVSVIISVFY 207


>At5g25580.1 68418.m03044 expressed protein 
          Length = 405

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -2

Query: 486 ALAKKIIDPESVIYNVEAAKPVTFTRSCKNRV 391
           A+ KK+   E ++ NV  ++P+  TRSC+N +
Sbjct: 286 AIKKKM--KEEMVVNVNFSRPLRTTRSCRNHM 315


>At3g48520.1 68416.m05296 cytochrome P450 family protein similar to
           Cytochrome P450 94A1  (P450-dependent fatty acid
           omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains
           Pfam profile: PF00067 cytochrome P450
          Length = 506

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = -3

Query: 314 WASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRI-VSVDKATVDKVTEPKKV 138
           W +  +  +  RW+ S  GS     K + P +  VF+   R+ V  + A +        V
Sbjct: 405 WGTDSEEFNPNRWFDSEPGSTRPVLKPISPYKFPVFQAGPRVCVGKEMAFMQMKYVVGSV 464

Query: 137 IQRNIEVEPKVKDAKVSV 84
           + R  E+ P  KD  V V
Sbjct: 465 LSR-FEIVPVNKDRPVFV 481


>At5g04870.1 68418.m00510 calcium-dependent protein kinase isoform
           AK1 (AK1) identical to calcium-dependent protein kinase,
           isoform AK1 (CDPK) [Arabidopsis thaliana]
           SWISS-PROT:Q06850; contains protein kinase domain,
           Pfam:PF00069; contains EF hand domain (calcium-binding
           EF-hand), Pfam:PF00036, INTERPRO:IPR002048
          Length = 610

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 14/120 (11%)
 Frame = -3

Query: 326 SCKNWASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTE- 150
           S   W  R    S +   G    S+AV  +L     D+V  +P   V++ K   D  T+ 
Sbjct: 18  SAAMWRPRDGDDSASMSNGD-IASEAVSGELRSRLSDEVQNKPPEQVTMPKPGTDVETKD 76

Query: 149 --------PKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKD-----VSKEKLKTE 9
                   P+ + + ++E +P+ K    S     S+P     PKK      VS   L+TE
Sbjct: 77  REIRTESKPETLEEISLESKPETKQETKSETKPESKPDPPAKPKKPKHMKRVSSAGLRTE 136


>At4g31900.1 68417.m04533 chromatin remodeling factor, putative
           strong similarity to chromatin remodeling factor CHD3
           (PICKLE) [Arabidopsis thaliana] GI:6478518; contains
           Pfam profiles PF00271: Helicase conserved C-terminal
           domain, PF00176: SNF2 family N-terminal domain
          Length = 1202

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -3

Query: 221 QDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVS 87
           +DKV  +   I+ VD ++  K    K VI  N +V  K +DAK+S
Sbjct: 443 KDKVPPKKELILRVDMSSQQKEVY-KAVITNNYQVLTKKRDAKIS 486


>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
           NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
           protein NAP57) {Rattus norvegicus}; contains Pfam
           profiles PF01509: TruB family pseudouridylate synthase
           (N terminal domain), PF01472: PUA domain; supporting
           cDNA gi|8901185|gb|AF234984.2|AF234984
          Length = 565

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 24/108 (22%), Positives = 46/108 (42%)
 Frame = -3

Query: 338 RYKESCKNWASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDK 159
           ++ +S  + A    + S T+        + VKS   + K+DK  E+     S  K    K
Sbjct: 443 KHDDSSDSPAPVTTKKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKK 502

Query: 158 VTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLK 15
             + ++VI+     + + K  K S KD  +     ++   + S++K K
Sbjct: 503 KDKKEEVIEEVASPKSEKKKKKKS-KDTEAAVDAEDESAAEKSEKKKK 549


>At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG
           binding domain-containing protein contains Pfam profiles
           PF00628: PHD-finger (2 copies), PF01429: Methyl-CpG
           binding domain
          Length = 2176

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -3

Query: 329 ESCKNWASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSR 192
           ESC N+ +   RSS +     + G+  VK K  +  +D+VF E SR
Sbjct: 689 ESCTNYRTLKSRSSSSVPITVAEGALVVKPKGGENVKDEVFGEISR 734


>At2g24050.1 68415.m02873 MIF4G domain-containing protein / MA3
           domain-containing protein similar to SP|Q03387
           Eukaryotic initiation factor (iso)4F subunit P82-34
           (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam
           profiles PF02854: MIF4G domain, PF02847: MA3 domain
          Length = 747

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/79 (18%), Positives = 33/79 (41%)
 Frame = -3

Query: 326 SCKNWASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEP 147
           S K W     R + + W GS      +K+++    +     +  R+V   K  ++K+T  
Sbjct: 129 SGKEWLRDDPREAKSTWQGSGPTPVLIKAEVPWSAKRGALSDKDRVVKSVKGILNKLTPE 188

Query: 146 KKVIQRNIEVEPKVKDAKV 90
           K  + +   ++  +  A +
Sbjct: 189 KYELLKGQLIDAGITSADI 207


>At1g58190.1 68414.m06605 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; contains similarity to Cf-2.2
           [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
          Length = 1784

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 135 NYFFRLCNLVNSRFINGHNSTWFLKHLVLLWLHQFTFHRLAPCT 266
           N  F+L +L  ++F     S +  +H+ LL+LH   F    P T
Sbjct: 560 NVSFQLLDLSRNKFSGNLPSHFSFRHMGLLYLHDNEFSGPVPST 603


>At1g17130.1 68414.m02087 cell cycle control protein-related
           contains similarity to Swiss-Prot:Q9P7C5 cell cycle
           control protein cwf16 [Schizosaccharomyces pombe]
          Length = 331

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = -3

Query: 206 EEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPK---KD 36
           E+  RI   D+A +  +   +K + R I  E    D      DI   PS+ ++ K    D
Sbjct: 182 EKVKRIEEEDEAVIKSIFGKQKEVIRRIADEEI--DDDYDDDDIDDYPSLQKEKKGSSSD 239

Query: 35  VSKEKLKTEIT 3
           +SK++  TE++
Sbjct: 240 LSKKRKATEVS 250


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,966,935
Number of Sequences: 28952
Number of extensions: 211970
Number of successful extensions: 758
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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