Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0049
(517 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 38 0.005
At3g57780.1 68416.m06436 expressed protein 31 0.46
At2g02720.1 68415.m00214 pectate lyase family protein similar to... 31 0.46
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f... 30 0.80
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 30 0.80
At3g28770.1 68416.m03591 expressed protein 30 0.80
At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative si... 29 1.4
At5g64420.1 68418.m08092 DNA polymerase V family contains Pfam d... 29 1.9
At5g45520.1 68418.m05591 hypothetical protein 29 1.9
At3g54290.1 68416.m06000 expressed protein contains Pfam PF03794... 29 2.5
At2g22795.1 68415.m02704 expressed protein 29 2.5
At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containi... 29 2.5
At1g09720.1 68414.m01091 kinase interacting family protein simil... 29 2.5
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 28 3.2
At5g06430.1 68418.m00720 thioredoxin-related contains weak simil... 28 4.3
At3g43390.1 68416.m04592 hypothetical protein similar to At3g243... 28 4.3
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 28 4.3
At1g11790.1 68414.m01353 prephenate dehydratase family protein s... 28 4.3
At4g13780.1 68417.m02137 methionine--tRNA ligase, putative / met... 27 5.7
At4g05280.1 68417.m00799 Ulp1 protease family protein contains P... 27 5.7
At5g20540.1 68418.m02439 expressed protein 27 7.5
At5g15430.1 68418.m01806 calmodulin-binding protein-related has ... 27 7.5
At4g15820.1 68417.m02407 wound-responsive protein-related contai... 27 7.5
At3g11240.1 68416.m01367 arginine-tRNA-protein transferase, puta... 27 7.5
At1g34160.1 68414.m04237 pentatricopeptide (PPR) repeat-containi... 27 7.5
At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recogniti... 27 9.9
At5g22340.1 68418.m02606 expressed protein 27 9.9
At4g09950.1 68417.m01628 avirulence-responsive family protein / ... 27 9.9
At3g47180.1 68416.m05123 zinc finger (C3HC4-type RING finger) fa... 27 9.9
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 27 9.9
At1g49980.1 68414.m05609 UMUC-like DNA repair family protein low... 27 9.9
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 27 9.9
At1g25886.1 68414.m03180 Ulp1 protease family protein contains P... 27 9.9
At1g23230.1 68414.m02906 expressed protein 27 9.9
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 37.5 bits (83), Expect = 0.005
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +3
Query: 147 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKE 326
R+ + NE+ + + E E+ K+ + EK Q+K + +E+N K+ +E +
Sbjct: 744 REKEENERRIKEAREKAELEQRLKATLEQEEK--ERQIKERQEREENERRAKEVLEQAEN 801
Query: 327 KNKFLNGIENFD-PTKLKHTETCEKNPLPTKDVIEQEK 437
+ K +E + +LK T E+N ++ IE E+
Sbjct: 802 ERKLKEALEQKENERRLKETREKEENKKKLREAIELEE 839
Score = 30.7 bits (66), Expect = 0.61
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +3
Query: 156 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNK 335
+ NE+ E E+ K + +K + +LK T +E+N ++AIE E+++ +
Sbjct: 786 EENERRAKEVLEQAENERKLKEALE--QKENERRLKETREKEENKKKLREAIELEEKEKR 843
Query: 336 FLNGIENFD-PTKLKHTETCEKNPLPTKDVIEQEK 437
+ E + +LK E+ + ++ E+E+
Sbjct: 844 LIEAFERAEIERRLKEDLEQEEMRMRLQEAKERER 878
>At3g57780.1 68416.m06436 expressed protein
Length = 670
Score = 31.1 bits (67), Expect = 0.46
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 210 TQKSLFDGIEKFDSSQLKHTETQEK-NPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTE 386
TQ L D + + + TE +E N L D E EKE++K L+ I + + E
Sbjct: 58 TQSKLSDDDDHAVNDSSEKTEKEETINGLACDDEDEEEKEESKELDAIAHEKTDSVSSPE 117
Query: 387 TCE 395
TCE
Sbjct: 118 TCE 120
>At2g02720.1 68415.m00214 pectate lyase family protein similar to
pectate lyase P59 SP:P15722 from [Lycopersicon
esculentum]
Length = 455
Score = 31.1 bits (67), Expect = 0.46
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +3
Query: 261 KHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 434
K +E P P+ + + EK+ FLNG K KNP+P K I +
Sbjct: 375 KQVTKREYTPYPEWKSWNWQSEKDYFLNGAYFVQSGKANAWSATPKNPIPRKFAIRPQ 432
>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 271
Score = 30.3 bits (65), Expect = 0.80
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 209 LLSGNVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLG 90
++ GN +KHNL IG+D AG + + LQ C ++G
Sbjct: 41 IMDGNRRFAKKHNL-IGLDAGHRAGFISVKYILQYCKEIG 79
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 30.3 bits (65), Expect = 0.80
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 189 EDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKN 332
EDV EK D +++ D Q + ++EK +KD E EKEK+
Sbjct: 642 EDVVQEKDGDQEEDVVQEKDGDQEEDGVSKEKEQEKEKDPKEKEKEKD 689
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.3 bits (65), Expect = 0.80
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +3
Query: 159 TNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKF 338
TNE V E+V K + + EK +S K ET++ L + + KE++
Sbjct: 763 TNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSGE 822
Query: 339 LNGIENFDPTKLKHTETCEKN 401
N + + + E EKN
Sbjct: 823 DNKEDKEESKDYQSVEAKEKN 843
Score = 28.7 bits (61), Expect = 2.5
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = +3
Query: 63 SDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEK 242
S T S D K D + + + + D K +++ KT ++ E+
Sbjct: 716 SQTDSKDD--KSVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENKKTKTNENRVRNKEE 773
Query: 243 FDSSQLKHTETQEKNPLPD-KDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKD 419
K +E EK + KDA E + NK L+ EN D K + E +++ +KD
Sbjct: 774 NVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSGEDNKEDKEESKD 833
>At5g11110.1 68418.m01297 sucrose-phosphate synthase, putative
similar to sucrose-phosphate synthase isoform 1, Citrus
unshiu, PIR:S72648
Length = 894
Score = 29.5 bits (63), Expect = 1.4
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 57 SVSDTPS--LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVA-TEKTQKSLF 227
S SD+PS L+D+ ++ +LK L+G + VDTN +AE A EK +L
Sbjct: 532 SDSDSPSDSLRDINDISLNLKLSLDGEKSGSNNGVDTNLDAEDRAAERKAEVEKAVSTLA 591
Query: 228 D---GIEKFDS 251
EKFDS
Sbjct: 592 QKSKPTEKFDS 602
>At5g64420.1 68418.m08092 DNA polymerase V family contains Pfam
domain PF04931: DNA polymerase V
Length = 1306
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 267 TETQEKNPLPDKDAIEAEKEKNKFLNGIENFD 362
TE E + LPD ++ +K K + +N + N+D
Sbjct: 12 TELVENDNLPDSSIVKKKKSKTEKMNTVANYD 43
>At5g45520.1 68418.m05591 hypothetical protein
Length = 1167
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 210 TQKSLFDGIEKFDSSQLKHTET-QEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTE 386
T K L D +E+ D + +T +E+ ++ + + ++ +N N + K KH E
Sbjct: 575 TDKKLKDLMEREDDQVQNYGQTSKEEKGNVEETGKQEDGDQGDGINEEANLEDGK-KHDE 633
Query: 387 TCEKNPLPTKDVIEQEK 437
E+ L + +V+E+EK
Sbjct: 634 GKEERSLKSDEVVEEEK 650
>At3g54290.1 68416.m06000 expressed protein contains Pfam PF03794:
Domain of Unknown function
Length = 350
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 216 KSLFDGIEKFDSSQLK---HTETQEKNPLPDKDAIEAEKEKNKFL 341
++LF +F S Q+ H E +EK+ LP +A E KEK K L
Sbjct: 252 EALFSLASRFKSLQMMCKTHFEEEEKDLLPMVEAAEMGKEKQKKL 296
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 28.7 bits (61), Expect = 2.5
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Frame = +3
Query: 102 TDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQE 281
T+ K ++E + D +T EKI E E+T++ + EK +SS + TE +E
Sbjct: 471 TEAKEKVESSSQEKNEDKET-EKI-----ESSFLEETKEKEDETKEKEESSSQEKTEEKE 524
Query: 282 KNPLPDKDAIEAEKEKNKFLNGIE-----NFDPTKLKHTETCEKNPLPTKDVIEQEKS 440
++++ E+ K+K IE + + +K TET EK +++ +++++
Sbjct: 525 TETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKEN 582
Score = 28.3 bits (60), Expect = 3.2
Identities = 21/98 (21%), Positives = 44/98 (44%)
Frame = +3
Query: 147 RDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKE 326
++ + EK+ S E ++T EK +SS L+ T+ +E +++ EK
Sbjct: 469 KETEAKEKVESSSQEKNEDKET--------EKIESSFLEETKEKEDETKEKEESSSQEKT 520
Query: 327 KNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKS 440
+ K +N + + + T+ E + ++ QE+S
Sbjct: 521 EEKETETKDNEESSSQEETKDKENEKIEKEEASSQEES 558
>At2g17410.1 68415.m02009 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 786
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 57 SVSDTPSLKDLPKVATDLKSQLEGF---NTSCLRDVDTNEKIVLPSAEDVATEKTQKS 221
S+ + + DLPK+ + SQ E + S +DT E ++ P+AED E S
Sbjct: 78 SLEEVTNADDLPKIDDEKNSQFETSPHPSPSPSVALDTEEGLINPTAEDTVEENIVSS 135
>At1g09720.1 68414.m01091 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 928
Score = 28.7 bits (61), Expect = 2.5
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +3
Query: 51 ACSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFD 230
AC VSD+ D+ K T L+ +L R D N+ + E +T K
Sbjct: 384 ACLVSDS---MDMKKRITVLEDELRKVKNLFQRVEDQNKNLHKHLTEANSTAKDLSGKLQ 440
Query: 231 GI---EKFDSSQLKHTETQEKNPLPDKDAIEAEKE 326
+ E + L + QE++ + D D+I E+E
Sbjct: 441 EVKMDEDVEGDGLNPEDIQEEDTVEDSDSISNERE 475
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +3
Query: 153 VDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKN 332
V + E +LP E +T SL FD E QE+ P + ++E EK +
Sbjct: 112 VVSEEDHLLPKKEYFSTAVALGSLKSRASVFDDEDYDEEEEQEEEQAPVEKSLETEKREP 171
Query: 333 KFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 434
L + + + + + +++ + T+DV E+E
Sbjct: 172 VVLKEDKALEYEE-EASILDKEDHMDTEDVQEEE 204
>At5g06430.1 68418.m00720 thioredoxin-related contains weak
similarity to Swiss-Prot:Q9SEU7 thioredoxin M-type 3,
chloroplast precursor (TRX-M3) [Arabidopsis thaliana]
Length = 194
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Frame = -2
Query: 381 CASA*WD--RSSRCRSGICSFPSPLR*RLCPEAGSSPESRCASAGSNQTSRYRRIKTSGS 208
C WD + + S +C F P R GS S S G N R ++ S S
Sbjct: 19 CLKWPWDSNKQPKSSSSVCDFQGPWLFRSMQTIGSIALSSLTSFGQNPNFRPKKKPLSSS 78
Query: 207 SQWQRLQQTEA 175
Q + Q+ A
Sbjct: 79 EQGEAEQRAFA 89
>At3g43390.1 68416.m04592 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886, At4g03300
Length = 1113
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 255 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 434
QL+ T+ + K P E +K K D K ++ E C P+P + ++E
Sbjct: 413 QLEETDVKRKRNAPGPSPKEPAMKKQK-----SEMDCDKEENAEDCFGEPVPERFIVEMR 467
Query: 435 KS 440
+S
Sbjct: 468 RS 469
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 275 SGEEPASGQRRYRSGEGKEQIPERHRELRSH*AEAHGDVRKEPAPHKGRH*AREIXLNHY 454
S E+ A R + + K + ER + SH ++ +R EP H RE+ Y
Sbjct: 489 SAEQKAQEIRAAAASDFKTMLREREISINSHWSKVKDSLRNEPRYRSVAHEDREVFYYEY 548
>At1g11790.1 68414.m01353 prephenate dehydratase family protein
similar to gi|2392772 and is a member of the PF|00800
Prephenate dehydratase family. ESTs gb|T21562 and
gb|T21062 come from this gene
Length = 392
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -2
Query: 339 GICSFPSPLR*RLCP-EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFH 163
G+ F + R R C E SS R +A + R +K S S + Q+T++ SFH
Sbjct: 23 GLAEFDADKRRRFCLWECSSSASQRAVTAIEGEIPFSRELKKS-SDELGLTQETQSLSFH 81
>At4g13780.1 68417.m02137 methionine--tRNA ligase, putative /
methionyl-tRNA synthetase, putative / MetRS, putative
similar to methionyl-tRNA synthetase [Oryza sativa]
GI:4091008; contains Pfam profiles PF00133: tRNA
synthetases class I (I, L, M and V), PF01588: Putative
tRNA binding domain
Length = 797
Score = 27.5 bits (58), Expect = 5.7
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Frame = +3
Query: 60 VSDTP-SLKDLP-KVATDLKSQLEGFNTSCLRDVDTNEKI----VLPSAEDVATEKTQKS 221
VSDT S DL K+ +L S L F L + + V+P A D + KS
Sbjct: 383 VSDTSFSWTDLQAKLNGELLSNLGNFVNRVLSFIAKPDNAGYGSVIPDAHDAESHSLTKS 442
Query: 222 LFDGIEKFDSSQLKHTETQEKNPLPD--KDAIEAEKEKNKFL 341
L + +EKF + ++ E EK L K A+ E N +L
Sbjct: 443 LAEKVEKFVA---EYVEAMEKVKLKQGLKTAMLISSEGNYYL 481
>At4g05280.1 68417.m00799 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At1g25886, At4g03300
Length = 1312
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 255 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 434
QL+ T+ + K P E +K I D K ++ E C P+P + ++E
Sbjct: 359 QLEETDVKRKRNAPGPSPKEPAMKKQ-----ISEMDCDKEENAEDCFGEPVPERFIVEMR 413
Query: 435 KS 440
+S
Sbjct: 414 RS 415
>At5g20540.1 68418.m02439 expressed protein
Length = 384
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 60 VSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 206
++ TP + + T+ S +S RD D +E++ + +A DV E
Sbjct: 282 LNSTPKVSSISVAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNE 330
>At5g15430.1 68418.m01806 calmodulin-binding protein-related has
weak similarity to calmodulin-binding proteins
Length = 478
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 360 RSSRCRSGICSFPSPLR*RLCPEAGSSPESRCASAG 253
R SR SG + SPLR + + SP RC S G
Sbjct: 70 RVSRSFSGAINLDSPLRKKALTKPLLSPSRRCDSVG 105
>At4g15820.1 68417.m02407 wound-responsive protein-related contains
weak similarity to KED [Nicotiana tabacum]
gi|8096269|dbj|BAA95789
Length = 460
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 33 IY*FRMACSV---SDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 173
I+ F+ C+V D+ + P+V++D EG N L DV+ NEKI
Sbjct: 92 IFAFQTVCAVLFLGDSTKSEKTPEVSSDS----EGNNLVLLEDVEMNEKI 137
>At3g11240.1 68416.m01367 arginine-tRNA-protein transferase,
putative / arginyltransferase, putative /
arginyl-tRNA-protein transferase, putative similar to
SP|Q9ZT48 Arginine-tRNA-protein transferase 1 (EC
2.3.2.8) (R-transferase 1) (Arginyltransferase 1)
(Arginyl-tRNA--protein transferase 1) {Arabidopsis
thaliana}; contains Pfam profiles PF04377:
Arginine-tRNA-protein transferase C terminus, PF04376:
Arginine-tRNA-protein transferase N terminus
Length = 605
Score = 27.1 bits (57), Expect = 7.5
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 18/143 (12%)
Frame = +3
Query: 84 DLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSA--EDVATEKTQKSLFDGIEK--FDS 251
+L + DL Q++ C++ + + +P A + V + K +K L +G E + S
Sbjct: 155 ELEPIMKDLSEQIDNAVQKCIQSGEFPSNVQIPKASVKKVFSAK-RKKLAEGSEDLLYTS 213
Query: 252 S-------QLKHTETQEKNPLPDKDAIEAEKEKNKFL---NGIENFDPTKLK----HTET 389
+ +KHT+T EK +++ + E K L N + F +K H
Sbjct: 214 NIAFPIVAAMKHTQTLEKGKNVEENRLSPEAVSEKLLSAMNKVGEFTGFSVKVSKGHINF 273
Query: 390 CEKNPLPTKDVIEQEKSX*TTTL 458
+ + D E E+S TT+
Sbjct: 274 LSATQVTSSDRNEGEESLCATTI 296
>At1g34160.1 68414.m04237 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 558
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = -3
Query: 218 LLGLLSGNVFSRRKHNLFIGVDVTETAGVEAFELT----LQVCGDLGEVFQGGSVTHGAG 51
+ GL+SGN S L+ + ET G+ E+T L C LG+V +G ++ HG
Sbjct: 182 IAGLVSGNRASEAME-LYKRM---ETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS 237
Query: 50 HSESI 36
+ I
Sbjct: 238 NDNVI 242
>At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recognition
Nexus) repeat-containing protein contains Pfam profile
PF02493: MORN repeat
Length = 871
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 204 EKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAE 320
EK+ K + DG+EK+ + K E +++ + + +EAE
Sbjct: 581 EKSVKPMLDGLEKWTEEKKKAYEERKEMIQQELELVEAE 619
>At5g22340.1 68418.m02606 expressed protein
Length = 323
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 144 LRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQE 281
L +D N SA V + T++SL DG + +S LK TQE
Sbjct: 87 LESIDVNSNGASSSA--VELDDTRESLIDGADDDESGFLKLKPTQE 130
>At4g09950.1 68417.m01628 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 336
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 204 EKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLK 377
EK+ + +GI++ S+QLK + K L A E EK +N I+ +++
Sbjct: 254 EKSHNEMLEGIKEKISNQLKESLEDVKEQLAKAQAEREETEKK--MNEIQKLSSDEIR 309
>At3g47180.1 68416.m05123 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 210
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = +3
Query: 156 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNK 335
D++ ++ D +E ++ + E FDS+ E + L D+++ +E++
Sbjct: 45 DSSPSMISMIESDEESEDEEEINENYYEYFDSNGFGVDEDEINEFLEDQESNSNLEEEDD 104
Query: 336 FLNGIENFDPTKLKHTE 386
FL + DP +L + E
Sbjct: 105 FLEEEDEIDPDQLSYEE 121
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 189 EDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPT 368
+ VA +KS DG +K D+ +E +NP D+I + NKF + PT
Sbjct: 436 QSVAVGYLKKSGLDGEKKLDTETAFDSEMSGRNPYDADDSI-IKSITNKFEQALLPESPT 494
>At1g49980.1 68414.m05609 UMUC-like DNA repair family protein low
similarity to DNA polymerase kappa [Mus musculus]
GI:14279087; contains Pfam profile PF00817:
ImpB/MucB/SamB family
Length = 785
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 212 GLLSGNVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGE 87
GL G + + +++ +T +AGV A L +VC D+ +
Sbjct: 214 GLSGGEIAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINK 255
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 255 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 434
QL+ T+ + K P E +K K D K + E C P+P + ++E
Sbjct: 393 QLEETDVKRKRNAPGPSPKEPAMKKQK-----SEMDCDKEETAEDCFGEPVPERFIVEMR 447
Query: 435 KS 440
+S
Sbjct: 448 RS 449
>At1g25886.1 68414.m03180 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At4g03300
Length = 1201
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 255 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQE 434
QL+ T+ + K P E +K K D K + E C P+P + ++E
Sbjct: 380 QLEETDVKRKRNAPGPSPKEPAMKKQK-----SEMDCDKEETAEDCFGEPVPERFIVEMR 434
Query: 435 KS 440
+S
Sbjct: 435 RS 436
>At1g23230.1 68414.m02906 expressed protein
Length = 1615
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 417 PLWGAGSFRTSPCASA*WDRSSRC-RSGICSFPSP 316
PL+G + P S W+R+ RC R I + PSP
Sbjct: 393 PLYGEDLAMSIPKGSLDWERAVRCIRHAIRTTPSP 427
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,177,361
Number of Sequences: 28952
Number of extensions: 212593
Number of successful extensions: 890
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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