Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0043
(712 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g08310.1 68417.m01372 expressed protein glutamic acid-rich pr... 32 0.43
At4g19230.2 68417.m02837 cytochrome P450 family protein cytochro... 31 0.57
At5g17930.1 68418.m02102 MA3 domain-containing protein low simil... 31 1.00
At3g19900.1 68416.m02520 expressed protein 29 2.3
At5g17240.1 68418.m02020 SET domain-containing protein contains ... 29 3.0
At4g02710.1 68417.m00366 kinase interacting family protein simil... 29 4.0
At3g20860.1 68416.m02637 protein kinase family protein contains ... 29 4.0
At5g64710.2 68418.m08135 expressed protein contains Pfam profile... 28 5.3
At5g64710.1 68418.m08134 expressed protein contains Pfam profile... 28 5.3
At5g31412.1 68418.m03722 hypothetical protein contains Pfam doma... 28 5.3
At3g04810.2 68416.m00521 protein kinase, putative similar to LST... 28 5.3
At3g04810.1 68416.m00520 protein kinase, putative similar to LST... 28 5.3
At2g34780.1 68415.m04270 expressed protein 28 5.3
At1g66130.1 68414.m07505 oxidoreductase N-terminal domain-contai... 28 5.3
At5g28290.1 68418.m03434 protein kinase, putative similar to LST... 28 7.0
At2g26780.1 68415.m03212 expressed protein contains Pfam profile... 27 9.3
At2g04230.1 68415.m00410 F-box family protein contains F-box dom... 27 9.3
>At4g08310.1 68417.m01372 expressed protein glutamic acid-rich
protein precursor - Plasmodium falciparum, PIR2:A54514
Length = 504
Score = 31.9 bits (69), Expect = 0.43
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +1
Query: 70 DEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGK 246
D K +K+H CL+ + DE N L+T + K + P+K+ A L K KDGK
Sbjct: 77 DVHKSFVKQHLVQCLAGAENDETSENSLET-EKKDDVTPVKEAA--ELSKEHTTKKDGK 132
>At4g19230.2 68417.m02837 cytochrome P450 family protein cytochrome
P450, Arabidopsis thaliana; supported by cDNA:
gi_15293092_gb_AY050980.1_
Length = 484
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1
Query: 406 ERASGLSRGSISHNSRLFGEGCCLCWPGKRQS 311
ERA+G S G +SR C LCWPG R+S
Sbjct: 439 ERATGFSMG----HSRFPKTDCPLCWPGSRRS 466
>At5g17930.1 68418.m02102 MA3 domain-containing protein low
similarity to SP|Q9P6R9 Cell cycle control protein cwf22
{Schizosaccharomyces pombe}; contains Pfam profile
PF02847: MA3 domain
Length = 707
Score = 30.7 bits (66), Expect = 1.00
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +1
Query: 103 ADCLSETKADE--QLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKV 276
A+ ++ET E + LK + + N +K C+++ S+ F+K + L +
Sbjct: 479 AEDIAETMDAEVVEAQKMLKLAEAQRMNTDSRKAIFCVIMSSEDYID--AFEKLLRL-DL 535
Query: 277 PNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHEKDPKHAL 408
P +D+ + L++ CL K + T C H+K+ K L
Sbjct: 536 PGKQDREIMRVLVECCLQEKAFNKFYTVLASKLCEHDKNHKFTL 579
>At3g19900.1 68416.m02520 expressed protein
Length = 222
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 156 LQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHD 13
L F H L + G+T F ++ ++ EG + DN+DDE +SL D
Sbjct: 42 LAFSHSLCLKTTYGKTDRRKFSRICSIVDDEG-NLDNSDDEEKESLDD 88
>At5g17240.1 68418.m02020 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 491
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 187 LKKYALCMLI-KSQLMTKDGKFKKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAW 363
LKK L + + + LMT + KD+ L+ N + L +++ CL + + ++ W
Sbjct: 57 LKKGELVLKVPRKALMTTESIIAKDLKLSDAVNLHNSLSSTQILSVCLLYEMSKEKKSFW 116
Query: 364 NYVKCYH 384
Y +H
Sbjct: 117 -YPYLFH 122
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 427 DYVFTRKERASGLSRGSISHNSRLFGEGCCL 335
DYVFT +E A +S+G+ + L EG CL
Sbjct: 781 DYVFTHRESAGEVSKGADLMDEFLKLEGMCL 811
>At3g20860.1 68416.m02637 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 427
Score = 28.7 bits (61), Expect = 4.0
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 40 VCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIK 219
VC+V + + + +KK R SE K +V L D+ N L + C I
Sbjct: 87 VCIVTSYCEGGDMTQMIKKSRGVFASEEKLCRWMVQLLLAIDYLHNNRVLHRDLKCSNI- 145
Query: 220 SQLMTKDGKFK-KDVALAKVPNAED 291
+TK+ + + D LAK+ +D
Sbjct: 146 --FLTKENEVRLGDFGLAKLLGKDD 168
>At5g64710.2 68418.m08135 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 716
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 46 VVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLI--- 216
VV + + K+N K + + ++ ++ V +K D K + EP+K L +
Sbjct: 237 VVSVEKMCQNMKQNDKDVKEESHQLQESSQEFVQVMKLMDVKAKEEPVKANQLAITAVDD 296
Query: 217 KSQLMTKDGKFKK 255
S KDG KK
Sbjct: 297 VSSFEEKDGFLKK 309
>At5g64710.1 68418.m08134 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 841
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 46 VVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLI--- 216
VV + + K+N K + + ++ ++ V +K D K + EP+K L +
Sbjct: 362 VVSVEKMCQNMKQNDKDVKEESHQLQESSQEFVQVMKLMDVKAKEEPVKANQLAITAVDD 421
Query: 217 KSQLMTKDGKFKK 255
S KDG KK
Sbjct: 422 VSSFEEKDGFLKK 434
>At5g31412.1 68418.m03722 hypothetical protein contains Pfam domain,
PF04937: Protein of unknown function (DUF 659)
Length = 433
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 97 HRADCLSETKADEQLVNKLKT-GDFKTENEPLKKYALCMLIKSQLMTKD-GKFKKDVALA 270
H D + E + + K++T GD+K EN L +Y C+L + +D G K + LA
Sbjct: 227 HTVDLMLEAISKLPKMGKMQTFGDYKGENLFLNRYESCVLEWCDVCVEDFGPLMKLLRLA 286
Query: 271 KVPN 282
N
Sbjct: 287 DGEN 290
>At3g04810.2 68416.m00521 protein kinase, putative similar to
LSTK-1-like kinase [Lycopersicon esculentum]
GI:15637110; contains Pfam profile: PF00069 Eukaryotic
protein kinase domain
Length = 578
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 40 VCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIK 219
VC+++ + E +KK +E K + LV L ++ N L + C I
Sbjct: 77 VCIIIGYCKGGDMAEAIKKTNGVHFTEEKLCKWLVQILLALEYLHANHILHRDVKCSNI- 135
Query: 220 SQLMTKDGKFK-KDVALAKVPNAED 291
+TKD + D LAKV ++D
Sbjct: 136 --FLTKDQDIRLGDFGLAKVLTSDD 158
>At3g04810.1 68416.m00520 protein kinase, putative similar to
LSTK-1-like kinase [Lycopersicon esculentum]
GI:15637110; contains Pfam profile: PF00069 Eukaryotic
protein kinase domain
Length = 606
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 40 VCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIK 219
VC+++ + E +KK +E K + LV L ++ N L + C I
Sbjct: 77 VCIIIGYCKGGDMAEAIKKTNGVHFTEEKLCKWLVQILLALEYLHANHILHRDVKCSNI- 135
Query: 220 SQLMTKDGKFK-KDVALAKVPNAED 291
+TKD + D LAKV ++D
Sbjct: 136 --FLTKDQDIRLGDFGLAKVLTSDD 158
>At2g34780.1 68415.m04270 expressed protein
Length = 1297
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 650 KRDKQSYDEHRRKLNFGSRSNMLQQLNKIYRTDID 546
+R+ Q + R KL FGS +N + L++ + TD++
Sbjct: 401 RREFQCEELGRLKLEFGSLTNRMNLLDEYFSTDVE 435
>At1g66130.1 68414.m07505 oxidoreductase N-terminal
domain-containing protein similar to AX110P [Daucus
carota] GI:285739; contains Pfam profile PF01408:
Oxidoreductase family NAD-binding Rossmann fold
Length = 364
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 250 KKDVALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAW 363
KK L + P A+D ++EK+++AC N T W
Sbjct: 95 KKKHVLVEKPPAQDATELEKIVEACEYNGVQFMDGTIW 132
>At5g28290.1 68418.m03434 protein kinase, putative similar to
LSTK-1-like kinase [Lycopersicon esculentum]
GI:15637110; contains Pfam profile: PF00069 Eukaryotic
protein kinase domain
Length = 568
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 40 VCVVLAQALTDEQKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIK 219
VC+V+ + E +KK SE K + LV L ++ + L + C I
Sbjct: 77 VCIVIGYCKGGDMAEAIKKANGVEFSEEKLCKWLVQLLMALEYLHASHILHRDVKCSNI- 135
Query: 220 SQLMTKDGKFK-KDVALAKVPNAED 291
+TKD + D LAK+ ++D
Sbjct: 136 --FLTKDQDIRLGDFGLAKILTSDD 158
>At2g26780.1 68415.m03212 expressed protein contains Pfam profile
TBP (TATA-binding protein) -interacting protein 120
(TIP120); contains TIGRFAM profile TIGR01612:
reticulocyte binding protein
Length = 1866
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 318 RLPGQQRQQPSPNSLELCEMLPRERPE 398
R P ++R++ +PN+LE LP++ E
Sbjct: 114 RAPAKEREEIAPNTLENVSKLPKQHQE 140
>At2g04230.1 68415.m00410 F-box family protein contains F-box domain
Pfam:PF00646
Length = 448
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 280 NAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHE 387
++ KL++ KL D L + +P + WN KC E
Sbjct: 333 DSSPKLQILKLTDVYLHDNKTNPDERKWNPPKCAPE 368
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,834,971
Number of Sequences: 28952
Number of extensions: 307558
Number of successful extensions: 820
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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