Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0011
(418 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43330.1 68415.m05388 sugar transporter family protein simila... 31 0.31
At5g45060.1 68418.m05525 disease resistance protein (TIR-NBS-LRR... 30 0.72
At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-contain... 29 0.95
At1g73850.1 68414.m08550 expressed protein 29 1.3
At4g14290.1 68417.m02202 expressed protein contains Interpro ent... 28 2.2
At4g33530.1 68417.m04765 potassium transporter family protein si... 27 3.8
At4g33030.1 68417.m04699 UDP-sulfoquinovose synthase / sulfite:U... 27 5.1
At1g16070.1 68414.m01928 tubby family protein similar to Tubby r... 27 5.1
At5g37390.1 68418.m04498 hypothetical protein contains Pfam prof... 27 6.7
At3g14520.1 68416.m01840 terpene synthase/cyclase family protein... 27 6.7
At3g09360.1 68416.m01110 transcription factor IIB (TFIIB) family... 27 6.7
At5g38900.1 68418.m04705 DSBA oxidoreductase family protein cont... 26 8.9
At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger) fa... 26 8.9
At5g15110.1 68418.m01770 pectate lyase family protein similar to... 26 8.9
At3g47330.1 68416.m05144 hypothetical protein contains Pfam prof... 26 8.9
At3g45540.1 68416.m04918 zinc finger (C3HC4-type RING finger) fa... 26 8.9
At3g06120.1 68416.m00703 basic helix-loop-helix (bHLH) family pr... 26 8.9
At3g01680.1 68416.m00099 expressed protein 26 8.9
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put... 26 8.9
At1g80390.1 68414.m09411 auxin-responsive AUX/IAA family protein... 26 8.9
>At2g43330.1 68415.m05388 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens], SP|Q01440 Membrane transporter D1
{Leishmania donovani}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 509
Score = 31.1 bits (67), Expect = 0.31
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 103 TMLLFSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEP 282
T + F + A AVLAV V G T SE+ + W + N S + + SD N++E
Sbjct: 442 TGMTFLILAGIAVLAVIFVIVFVPETQGLTFSEVEQIWKERAYGNISGWGSSSDSNNME- 500
Query: 283 YPLALSEEGNQ 315
L E+G+Q
Sbjct: 501 ---GLLEQGSQ 508
>At5g45060.1 68418.m05525 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1165
Score = 29.9 bits (64), Expect = 0.72
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 181 DGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSE 303
DG++IS+LP+N K R + LN D LE P +SE
Sbjct: 734 DGTSISQLPDNVGNLK---RLVLLNMKDCKVLETIPTCVSE 771
>At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
contains Pfam profiles PF01852: START domain, PF00169:
PH domain
Length = 718
Score = 29.5 bits (63), Expect = 0.95
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 139 VLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQD 318
V+ A + S K G ++ + + DQT NR+ L D +D + + +A SE+ +
Sbjct: 404 VMVNMASSSLSLTKSGKSLHKSAFSLDQTNSVNRNSLLMDEDSDDDDEFQIAESEQEPET 463
Query: 319 GYDQT-VDQRFDSPQSNGEL 375
+T V + + P N +L
Sbjct: 464 SKPETDVKRPEEEPAHNIDL 483
>At1g73850.1 68414.m08550 expressed protein
Length = 575
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/62 (25%), Positives = 25/62 (40%)
Frame = +1
Query: 199 ELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGYDQTVDQRFDSPQSNGELG 378
E E + +D N S ++ PY S E DG + D R+D + E+G
Sbjct: 56 EHEEEEEDDQDSNTSSTEEHFSSANVSPYRSESSIEEEDDGVEDLPDDRYDDDDEDEEVG 115
Query: 379 NL 384
+
Sbjct: 116 GV 117
>At4g14290.1 68417.m02202 expressed protein contains Interpro entry
IPR000379
Length = 534
Score = 28.3 bits (60), Expect = 2.2
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 148 VSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGY- 324
+S PSN+ + SE E + S + D ++ +PYP L+ + D Y
Sbjct: 364 MSRTEVPSNDPSNQSSSETKEKESLEVSSSSSSDMISFDLSNGDPYPPHLAVALDDDQYV 423
Query: 325 DQTVDQRFDSPQSNGELGNLIM 390
+ VD+ D P + E ++M
Sbjct: 424 EFHVDELADFPSNAEEEERMLM 445
>At4g33530.1 68417.m04765 potassium transporter family protein
similar to K+ transporter HAK5 [Arabidopsis thaliana]
GI:7108597; KUP/HAK/KT Transporter family member,
PMID:11500563; contains Pfam profile PF02705: K+
potassium transporter
Length = 855
Score = 27.5 bits (58), Expect = 3.8
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +1
Query: 157 VPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGYDQTV 336
V S+ DGS I E D T +R +F +K+D E ++E+ + DGYD+
Sbjct: 4 VEEESSGGDGSEIDEEFGGDDSTTSLSRWVF---DEKDDYE-----VNEDYDDDGYDEHN 55
Query: 337 DQRFDSPQSNGELGNLIMR 393
DS + + + ++R
Sbjct: 56 HPEMDSDEEDDNVEQRLIR 74
>At4g33030.1 68417.m04699 UDP-sulfoquinovose synthase /
sulfite:UDP-glucose sulfotransferase / sulfolipid
biosynthesis protein (SQD1) identical to gi:2736155
Length = 477
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 176 TKMAVPSVNCQKIGIKQKMIT 238
TK +PSV+ +KIG+K K +T
Sbjct: 456 TKQIMPSVSWKKIGVKTKSMT 476
>At1g16070.1 68414.m01928 tubby family protein similar to Tubby
related protein 1 (Tubby-like protein 1)
(Swiss-Prot:Q9Z273) [Mus musculus]; low similarity to
Tubby related protein 1 (Tubby-like protein 1)
(Swiss-Prot:O0029) {Homo sapiens}; similar to
phosphodiesterase (GI:467578) [Mus musculus]; contains
Pfam profile PF01167: Tub family
Length = 397
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 85 LF*PTVTMLLFSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSL 246
+F PT+T S + +L +NNK S+LP +W + K+ + L
Sbjct: 257 IFTPTITTWTGSYRRMRTLLPKQQPMQKNNNKQVQQASKLPLDWLENKEKIQKL 310
>At5g37390.1 68418.m04498 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 628
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 175 NKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPL 291
NKD LP+N DDN + D +D + PL
Sbjct: 105 NKDDGDDDNLPQNMQDGDDDNLPQNMQDDDDDDDDNQPL 143
>At3g14520.1 68416.m01840 terpene synthase/cyclase family protein
similar to terpene synthase GB:CAA72074 from
[Arabidopsis thaliana]
Length = 605
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +3
Query: 15 NASGVPPE--HHILRDLFILFYCPSTILTDRDYV 110
N SG P HI L+I YC +L R+Y+
Sbjct: 234 NVSGATPHLLKHIQNSLYIPRYCNIEVLVAREYI 267
>At3g09360.1 68416.m01110 transcription factor IIB (TFIIB) family
protein contains Pfam domain, PF00382: Transcription
factor TFIIB repeat
Length = 600
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 217 DQTKDDNRSLFLNKSDKNDLEPYPLALSEEGNQDGYDQTVD 339
++ K++N+ + N+ + + E EEGN + YD D
Sbjct: 536 EKKKEENKEMKSNEHENGENEDEDEEDEEEGNVESYDMKTD 576
>At5g38900.1 68418.m04705 DSBA oxidoreductase family protein
contains Pfam profile: PF01323 DSBA-like thioredoxin
domain
Length = 217
Score = 26.2 bits (55), Expect = 8.9
Identities = 9/41 (21%), Positives = 21/41 (51%)
Frame = +3
Query: 6 HITNASGVPPEHHILRDLFILFYCPSTILTDRDYVIIFPNR 128
H T +H ++ +LFI ++ + DR++++ N+
Sbjct: 114 HYTGKQAPEKQHTLVEELFIGYFTQGKFIGDREFLVETANK 154
>At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 362
Score = 26.2 bits (55), Expect = 8.9
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +1
Query: 136 AVLAVSAVPTPSNNKDGSTISELPENWDQTKDDN-----RSLFLNKSDKNDLEPYPLALS 300
+V+ + + S N D + +LPE +TKD++ RS+ LN + +
Sbjct: 237 SVVVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADVLREIE 296
Query: 301 EEGNQDGYDQTVDQRFDSPQSNGE 372
+E + G T +R + +G+
Sbjct: 297 DEEGESGGVGTSQRREEGEDGDGK 320
>At5g15110.1 68418.m01770 pectate lyase family protein similar to
pectate lyase P59 SP:P15722 from [Lycopersicon
esculentum]
Length = 472
Score = 26.2 bits (55), Expect = 8.9
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = +1
Query: 106 MLLFSLTAITAVLAVSAVPTPSNNKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPY 285
M+ S T +AV +PT N ISEL E W Q D+ R L +PY
Sbjct: 3 MVRLSKLMFTFCIAV-LIPTIRGN-----ISELDEYWSQRADEAREFTLQAYHS---DPY 53
Query: 286 PLALSEEGNQDGYDQTVDQRFDSPQSNGE 372
+ + ++ YD + D +P+ +G+
Sbjct: 54 EIV--DHFHERHYDNSTD--VTTPEEDGD 78
>At3g47330.1 68416.m05144 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 664
Score = 26.2 bits (55), Expect = 8.9
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 175 NKDGSTISELPENWDQTKDDNRSLFLNKSDKNDLEPYPL 291
NKD LP+N DDN + D +D + PL
Sbjct: 105 NKDDGDDDNLPQNMHDGDDDNLPQNMQDDDDDDDDNQPL 143
>At3g45540.1 68416.m04918 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature
Length = 348
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 286 GKVPNRFCHSCSRREIGYHLL 224
GK +RFC C RR I LL
Sbjct: 117 GKCRHRFCSDCMRRHIEVRLL 137
>At3g06120.1 68416.m00703 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 202
Score = 26.2 bits (55), Expect = 8.9
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -2
Query: 393 PHDKITEFSIGLW*VEALVNRLVIAILISFFAEGKRVRFQIVFVTLVQEERSVIIFCLIP 214
PH + G V +V+R ++ L+ + +++ FQ++ + + E +V+ F ++
Sbjct: 113 PHANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVK 172
Query: 213 I 211
I
Sbjct: 173 I 173
>At3g01680.1 68416.m00099 expressed protein
Length = 740
Score = 26.2 bits (55), Expect = 8.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 367 HWTVVSRSVGQPFGHSHLDFLLR*GQAGKVPNRF-CHSCSR 248
H V R G+P G H DF + ++G++P + C C R
Sbjct: 679 HHDEVLRETGKPCG--HFDFHIT-ARSGRIPEKMNCFECQR 716
>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
putative (ERECTA) identical to uncharacterized receptor
protein kinase ERECTA [Arabidopsis thaliana]
gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 976
Score = 26.2 bits (55), Expect = 8.9
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 247 FLNKSDKNDLEPYPLALSEEGNQDGYDQTVDQ-RFDSPQSNGELGNLI 387
+LN S N P P+ LS GN D D + ++ P S G+L +L+
Sbjct: 407 YLNLSSNNIKGPIPVELSRIGNLDTLDLSNNKINGIIPSSLGDLEHLL 454
>At1g80390.1 68414.m09411 auxin-responsive AUX/IAA family protein
similar to SP|Q38825|AXI7_ARATH Auxin-responsive protein
IAA7 (Indoleacetic acid-induced protein 7). [Mouse-ear
cress] {Arabidopsis thaliana}; contains Pfam profile:
PF02309: AUX/IAA family
Length = 179
Score = 26.2 bits (55), Expect = 8.9
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +1
Query: 307 GNQDGYDQTVDQRFDSPQSNGELGNLIMRPELYGEPP 417
GN+ + +TVD + N + +++ +L G PP
Sbjct: 40 GNKRRFLETVDLKLGEAHENNYISSMVTNDQLVGWPP 76
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,264,758
Number of Sequences: 28952
Number of extensions: 178823
Number of successful extensions: 559
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 635399168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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