Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0011
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72160.1 68414.m08343 SEC14 cytosolic factor family protein /... 35 0.050
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 31 0.62
At5g40450.1 68418.m04905 expressed protein 30 1.4
At5g09680.1 68418.m01120 cytochrome b5 domain-containing protein... 29 2.5
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 29 3.3
At2g12900.1 68415.m01408 hypothetical protein similar to transcr... 29 3.3
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 29 3.3
At2g27350.5 68415.m03295 OTU-like cysteine protease family prote... 28 7.6
At2g27350.4 68415.m03294 OTU-like cysteine protease family prote... 28 7.6
At2g27350.3 68415.m03293 OTU-like cysteine protease family prote... 28 7.6
At2g27350.2 68415.m03292 OTU-like cysteine protease family prote... 28 7.6
At2g27350.1 68415.m03291 OTU-like cysteine protease family prote... 28 7.6
>At1g72160.1 68414.m08343 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
GI:807956 from [Saccharomyces cerevisiae]similar to
polyphosphoinositide binding protein Ssh2p (GI:2739046)
{Glycine max}; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 490
Score = 35.1 bits (77), Expect = 0.050
Identities = 31/99 (31%), Positives = 46/99 (46%)
Frame = +2
Query: 38 DAPTITEVHQKESDKKPDDTQPSKISFSTQDSINSDIYSSNESTVTNGLPTAPSVTTTKA 217
+ PT T + E P T PS++S STQD++ ++ + + T TN P + TTTK
Sbjct: 3 EEPTTTTLVTPEKLPSPSLT-PSEVSESTQDALPTETETLEKVTETN--PPETADTTTK- 58
Query: 218 PIIEEEDTSLFDHNPAFPPIPDDLAVLSNHGDEIVPEPS 334
EE+T+ H PP + S E+ E S
Sbjct: 59 ---PEEETAAEHH----PPTVTETETASTEKQEVKDEAS 90
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 44 PTITEVHQKESDKK-PDDTQPSK-ISFSTQDSINSDIYSSNESTVTNGLPTAPSVTTTKA 217
P ++H K K+ +QPS IS T++ ++ +++ +GLP P TK+
Sbjct: 747 PPPVQIHSKRHSKRISTSSQPSSTISSPTKEETSATGPTTSNRNKKSGLPPMPKKAATKS 806
Query: 218 PIIEEED 238
I EE+
Sbjct: 807 QIQPEEE 813
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 30.3 bits (65), Expect = 1.4
Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 3/203 (1%)
Frame = +2
Query: 23 EIVKTDAPTITEVHQKESDKKPDDTQPSKISFSTQDSINSDIYSSNESTVT---NGLPTA 193
EI+ ++ +V E +KP PS++S T +++ I E VT G
Sbjct: 843 EILVAKPVSLLDVKSVEQMQKPKLESPSEVSEETSKTVDEKIEEKPEEEVTLYQEGQVDG 902
Query: 194 PSVTTTKAPIIEEEDTSLFDHNPAFPPIPDDLAVLSNHGDEIVPEPSAEGDHMTVHDTVX 373
TK + ++ + P D L E P E TV + +
Sbjct: 903 SYGLETKEETVSVPESIELEEQPQEERSVIDPTPLQKPTLE-SPSEVLEESSKTVDEKIE 961
Query: 374 XXXXXXXXXXXXXXXXXXXDIILTTEKPSVTSIETSTTAKQESTTVVEQLKESPMLNLRS 553
D+ E+ S + + T ++ E++K ++ + S
Sbjct: 962 EKTDSIELGEIAQEERSVTDLTPLQEESSQPNEQEKETKLEKHEPTNEEVKSDEVIEVLS 1021
Query: 554 AIPTEILNAPSLVPADTGEPLDD 622
A P++ L ++V A+ E + +
Sbjct: 1022 ASPSKELEGETVVEAENIENIKE 1044
>At5g09680.1 68418.m01120 cytochrome b5 domain-containing protein
flavohemoprotein b5+b5R, Homo sapiens, EMBL:AF169803
Length = 211
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 68 KESDKKPDDTQPSKISFSTQDSINSDIYSSNESTVTNGLPTAPSVTTTKAP 220
K+ P + +SF+ DS +S SNES+ T P +T TK P
Sbjct: 48 KDKSLPPKEETIGSLSFTVTDSSSSK-KQSNESSETFKTPARKPITRTKVP 97
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +2
Query: 446 TEKPSVTSIETSTTAKQE-STTVVEQLKESPMLNLRSAIPTEILNAPSL----VPADTGE 610
T PS + T K STT+VE++ E + L S TE + P
Sbjct: 83 TFSPSDAATAAVLTGKDSTSTTIVEEVMEPDEIGLPSVKITEAATGTARNGGGSPRTVSS 142
Query: 611 PLDDG--ITTDVPXNILNHRG 667
P G ++T P N+ +HRG
Sbjct: 143 PRFSGSPVSTGTPKNVDSHRG 163
>At2g12900.1 68415.m01408 hypothetical protein similar to
transcription factor(bZIP family) VSF-1 GI:3425907 from
[Lycopersicon esculentum]
Length = 264
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 95 TQPSKISFSTQDSI-NSDIYSSNESTVTNGLPTAPSVTTTKAPIIEEEDTSL-FDHNPAF 268
T PS TQ S+ +S + + S+ T + PS++ + + +E D+S+ + NP+
Sbjct: 8 TTPSGSRSMTQPSLASSSLPPLSPSSSTFRRNSLPSMSFSPSAPVESRDSSIKVNKNPSL 67
Query: 269 PPIPD 283
PP+ D
Sbjct: 68 PPLVD 72
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +2
Query: 431 DIILTTEKPSVTSIETSTTA----KQESTTVVEQLKESPMLNLRSA--IPTEILNAPSLV 592
+ ++T E P ++E T K+E TTVVE+++E + + TE + A ++
Sbjct: 132 EAVVTEEAPKAETVEAVVTEEIIPKEEVTTVVEKVEEETKEEEKKTEDVVTEEVKAETIE 191
Query: 593 PADTGEPLDDGI 628
D E +D I
Sbjct: 192 VEDEDESVDKDI 203
>At2g27350.5 68415.m03295 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 455 PSVTSIETSTTAKQESTTVVE--QLKESPMLNLRSAIPTEILNAPSLVPADTGEPLDDGI 628
P VT E T KQE TVVE + ++ + + S P + + LV A+ +GI
Sbjct: 41 PPVTIDEEITDEKQEEVTVVEKAECSDAKDVAVDSDEPADREDDEGLVVAENVHVQSEGI 100
Query: 629 TTDVP 643
D P
Sbjct: 101 DCDSP 105
>At2g27350.4 68415.m03294 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 455 PSVTSIETSTTAKQESTTVVE--QLKESPMLNLRSAIPTEILNAPSLVPADTGEPLDDGI 628
P VT E T KQE TVVE + ++ + + S P + + LV A+ +GI
Sbjct: 41 PPVTIDEEITDEKQEEVTVVEKAECSDAKDVAVDSDEPADREDDEGLVVAENVHVQSEGI 100
Query: 629 TTDVP 643
D P
Sbjct: 101 DCDSP 105
>At2g27350.3 68415.m03293 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 506
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 455 PSVTSIETSTTAKQESTTVVE--QLKESPMLNLRSAIPTEILNAPSLVPADTGEPLDDGI 628
P VT E T KQE TVVE + ++ + + S P + + LV A+ +GI
Sbjct: 41 PPVTIDEEITDEKQEEVTVVEKAECSDAKDVAVDSDEPADREDDEGLVVAENVHVQSEGI 100
Query: 629 TTDVP 643
D P
Sbjct: 101 DCDSP 105
>At2g27350.2 68415.m03292 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 455 PSVTSIETSTTAKQESTTVVE--QLKESPMLNLRSAIPTEILNAPSLVPADTGEPLDDGI 628
P VT E T KQE TVVE + ++ + + S P + + LV A+ +GI
Sbjct: 41 PPVTIDEEITDEKQEEVTVVEKAECSDAKDVAVDSDEPADREDDEGLVVAENVHVQSEGI 100
Query: 629 TTDVP 643
D P
Sbjct: 101 DCDSP 105
>At2g27350.1 68415.m03291 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 455 PSVTSIETSTTAKQESTTVVE--QLKESPMLNLRSAIPTEILNAPSLVPADTGEPLDDGI 628
P VT E T KQE TVVE + ++ + + S P + + LV A+ +GI
Sbjct: 41 PPVTIDEEITDEKQEEVTVVEKAECSDAKDVAVDSDEPADREDDEGLVVAENVHVQSEGI 100
Query: 629 TTDVP 643
D P
Sbjct: 101 DCDSP 105
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,338,889
Number of Sequences: 28952
Number of extensions: 252530
Number of successful extensions: 873
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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