Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10a12
(519 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 236 7e-63
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 236 7e-63
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 155 2e-38
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 155 2e-38
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 153 9e-38
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 153 9e-38
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 153 9e-38
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 152 1e-37
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 152 1e-37
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 152 1e-37
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 152 1e-37
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 152 1e-37
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 152 1e-37
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 152 1e-37
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 152 1e-37
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 152 1e-37
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 152 1e-37
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 152 1e-37
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 152 1e-37
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 152 1e-37
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 151 3e-37
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 151 4e-37
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 138 2e-33
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 117 4e-27
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 2e-20
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 69 1e-12
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 69 1e-12
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 64 5e-11
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 58 4e-09
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 58 4e-09
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 54 4e-08
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 1e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 51 4e-07
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 5e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 51 5e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 5e-07
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 1e-06
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 49 2e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 49 2e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 49 2e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 4e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 7e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 47 7e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 47 7e-06
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 46 2e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 46 2e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 2e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 46 2e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 2e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 6e-05
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 8e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 40 8e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 0.001
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 40 0.001
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.002
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.007
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.007
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 37 0.007
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.012
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 35 0.029
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 34 0.050
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.12
At4g14940.1 68417.m02294 copper amine oxidase, putative highly s... 31 0.47
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 0.81
At1g47680.1 68414.m05297 hypothetical protein 29 2.5
At4g38340.1 68417.m05420 RWP-RK domain-containing protein simila... 28 4.3
At4g16070.1 68417.m02437 lipase class 3 family protein low simil... 27 5.7
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi... 27 5.7
At3g46530.1 68416.m05051 disease resistance protein, RPP13-like ... 27 5.7
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 27 5.7
At2g19180.1 68415.m02238 expressed protein 27 5.7
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ... 27 5.7
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 27 7.6
At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containi... 27 7.6
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 236 bits (577), Expect = 7e-63
Identities = 110/123 (89%), Positives = 116/123 (94%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNN 395
IQKESTLHLVLRLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
Query: 396 LRP 404
LRP
Sbjct: 121 LRP 123
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 236 bits (577), Expect = 7e-63
Identities = 110/123 (89%), Positives = 116/123 (94%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNN 395
IQKESTLHLVLRLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
Query: 396 LRP 404
LRP
Sbjct: 121 LRP 123
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 155 bits (375), Expect = 2e-38
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGGTI 269
IQKESTLHLVLRLRGGT+
Sbjct: 61 IQKESTLHLVLRLRGGTM 78
Score = 100 bits (239), Expect = 7e-22
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3
Query: 24 RSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 203
R TM I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 74 RGGTM-IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTA 132
Query: 204 SDYNIQKESTLHLVLRLRGGTI 269
DY I+ S LHLVL LRGG +
Sbjct: 133 KDYAIEGGSVLHLVLALRGGLL 154
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 155 bits (375), Expect = 2e-38
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGGTI 269
IQKESTLHLVLRLRGGT+
Sbjct: 61 IQKESTLHLVLRLRGGTM 78
Score = 103 bits (246), Expect = 1e-22
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = +3
Query: 24 RSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 203
R TM I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 74 RGGTM-IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTA 132
Query: 204 SDYNIQKESTLHLVLRLRGG 263
DYNI+ S LHLVL LRGG
Sbjct: 133 KDYNIEGGSVLHLVLALRGG 152
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 153 bits (370), Expect = 9e-38
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 216 IQKESTLHLVLRLRGGT 266
IQKESTLHLVLRLRGG+
Sbjct: 365 IQKESTLHLVLRLRGGS 381
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 153 bits (370), Expect = 9e-38
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 216 IQKESTLHLVLRLRGGT 266
IQKESTLHLVLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGS 305
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 153 bits (370), Expect = 9e-38
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 216 IQKESTLHLVLRLRGGT 266
IQKESTLHLVLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGS 305
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 67.3 bits (157), Expect = 6e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 137
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 139 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 243
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 263 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 297
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 67.3 bits (157), Expect = 6e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 137
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 139 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 243
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 67.3 bits (157), Expect = 6e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 137
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 139 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 243
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 67.3 bits (157), Expect = 6e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 137
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 139 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 243
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 67.3 bits (157), Expect = 6e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 137
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 139 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 243
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 149 bits (361), Expect = 1e-36
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 212 IQKESTLHLVLRLRGG 227
Score = 145 bits (351), Expect = 2e-35
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 136 IQKESTLHLVLRLRGG 151
Score = 101 bits (243), Expect = 2e-22
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 194
MQIFVKTLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 151 bits (366), Expect = 3e-37
Identities = 72/76 (94%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 146 bits (355), Expect = 6e-36
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 216 IQKESTLHLVLRLRGGT 266
IQKESTLHLVLRLRGG+
Sbjct: 213 IQKESTLHLVLRLRGGS 229
Score = 135 bits (326), Expect = 2e-32
Identities = 63/76 (82%), Positives = 71/76 (93%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIF+KTLTGKT LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 216 IQKESTLHLVLRLRGG 263
+Q++STLHL+LR RGG
Sbjct: 61 VQEDSTLHLLLRFRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 151 bits (365), Expect = 4e-37
Identities = 71/76 (93%), Positives = 76/76 (100%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRLRGG
Sbjct: 139 IQKESTLHLVLRLRGG 154
Score = 140 bits (340), Expect = 4e-34
Identities = 68/76 (89%), Positives = 72/76 (94%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFV+TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRL GG
Sbjct: 215 IQKESTLHLVLRLCGG 230
Score = 135 bits (326), Expect = 2e-32
Identities = 68/77 (88%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDY 212
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 213 NIQKESTLHLVLRLRGG 263
NIQKESTLHLVLRLRGG
Sbjct: 291 NIQKESTLHLVLRLRGG 307
Score = 120 bits (288), Expect = 8e-28
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +3
Query: 33 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 212
+MQI KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY
Sbjct: 2 SMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61
Query: 213 NIQKESTLHLVLRLRGG 263
+IQK+S LHL LRLRGG
Sbjct: 62 SIQKDSILHLALRLRGG 78
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 138 bits (335), Expect = 2e-33
Identities = 68/76 (89%), Positives = 73/76 (96%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 216 IQKESTLHLVLRLRGG 263
IQKESTLHLVLRL GG
Sbjct: 139 IQKESTLHLVLRLCGG 154
Score = 134 bits (323), Expect = 4e-32
Identities = 65/77 (84%), Positives = 71/77 (92%)
Frame = +3
Query: 33 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 212
T+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DY
Sbjct: 2 TIQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADY 61
Query: 213 NIQKESTLHLVLRLRGG 263
NIQKESTLHLVLRLRGG
Sbjct: 62 NIQKESTLHLVLRLRGG 78
Score = 117 bits (282), Expect = 4e-27
Identities = 59/81 (72%), Positives = 67/81 (82%)
Frame = +3
Query: 15 VFHRSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 194
+F + MQIF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG
Sbjct: 545 LFLQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDG 604
Query: 195 RTLSDYNIQKESTLHLVLRLR 257
TL DY+I K+STL+LVLRLR
Sbjct: 605 VTLGDYDIHKKSTLYLVLRLR 625
Score = 108 bits (260), Expect = 2e-24
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
MQIFVK GK ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 216 IQKESTLHLVLRLRGG 263
I+ ESTLHL +R G
Sbjct: 453 IRNESTLHLFFHIRHG 468
Score = 107 bits (256), Expect = 6e-24
Identities = 55/76 (72%), Positives = 64/76 (84%), Gaps = 2/76 (2%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLEDGRTLSD 209
MQIFVKTLT K I LEVE+ DTIENVKA +QDKEGI P+ QRLIF GK+L+DG TL+D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 210 YNIQKESTLHLVLRLR 257
Y+IQKESTLHLVL ++
Sbjct: 379 YSIQKESTLHLVLGMQ 394
Score = 101 bits (242), Expect = 3e-22
Identities = 54/82 (65%), Positives = 64/82 (78%), Gaps = 7/82 (8%)
Frame = +3
Query: 36 MQIFVKTLTGK-----TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 194
MQIFV T +GK T+TL+VE+SDTIENVKAKIQD+EG+ PD QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 195 RTLSDYNIQKESTLHLVLRLRG 260
RTL+DY I+ STL L LRLRG
Sbjct: 215 RTLADYGIRNRSTLCLALRLRG 236
Score = 99 bits (238), Expect = 9e-22
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 5/81 (6%)
Frame = +3
Query: 36 MQIFVKTL-----TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 200
M IFVK L TG+ LEVE+SDTI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 201 LSDYNIQKESTLHLVLRLRGG 263
L+ YNIQK STL+LV R R G
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCG 318
Score = 99 bits (238), Expect = 9e-22
Identities = 55/89 (61%), Positives = 62/89 (69%), Gaps = 7/89 (7%)
Frame = +3
Query: 18 FHRSNTMQIFVKTL-------TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 176
FH + MQIFVKT T KTITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G
Sbjct: 463 FHIRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGG 522
Query: 177 KQLEDGRTLSDYNIQKESTLHLVLRLRGG 263
+ L RTL DYNIQK ST+H + RGG
Sbjct: 523 RVLVGSRTLLDYNIQKGSTIHQLFLQRGG 551
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 117 bits (282), Expect = 4e-27
Identities = 56/77 (72%), Positives = 63/77 (81%)
Frame = +3
Query: 24 RSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 203
R M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL
Sbjct: 82 RHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTL 141
Query: 204 SDYNIQKESTLHLVLRL 254
+DYNIQ +S LHL+ RL
Sbjct: 142 ADYNIQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 216 IQKESTLHLVLRLRGG 263
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/74 (40%), Positives = 50/74 (67%)
Frame = +3
Query: 30 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 209
+T+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+
Sbjct: 22 STLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSE 81
Query: 210 YNIQKESTLHLVLR 251
Y+++ TLHL++R
Sbjct: 82 YHLENGHTLHLIVR 95
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 69.3 bits (162), Expect = 1e-12
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 13/86 (15%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK------------ 179
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109
Query: 180 -QLEDGRTLSDYNIQKESTLHLVLRL 254
++ D D I E T LVLRL
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRL 135
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SDYN
Sbjct: 141 MRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYN 200
Query: 216 IQKESTL 236
I+ ++ L
Sbjct: 201 IKPDANL 207
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVE-ASDTIE 107
M I +KTL GK I LEVE +S+TI+
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTID 25
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 64.1 bits (149), Expect = 5e-11
Identities = 31/78 (39%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 27 SNTMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 203
S +QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L
Sbjct: 92 STRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSL 151
Query: 204 SDYNIQKESTLHLVLRLR 257
+ Y+I+++++L LV R++
Sbjct: 152 TYYSIEQDASLQLVARMQ 169
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 58.0 bits (134), Expect = 4e-09
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +3
Query: 30 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 206
+T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L +
Sbjct: 33 DTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMR 91
Query: 207 DYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 326
DY + + + LHLVL+L L++L +K C K CR
Sbjct: 92 DYGVSEGNILHLVLKL------SDLQVLDVKTTCGKH-CR 124
Score = 50.8 bits (116), Expect = 5e-07
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +3
Query: 12 HVFHRSNTMQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQ 182
H+ + + +Q+ VKT GK VE I VK +I K G + PD+Q +++ G++
Sbjct: 102 HLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEK 161
Query: 183 LEDGRTLSDYNIQKESTLHLVLR 251
LED ++D +S LHL++R
Sbjct: 162 LEDQSLINDICRNDDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 58.0 bits (134), Expect = 4e-09
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +3
Query: 30 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 206
+T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L +
Sbjct: 33 DTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMR 91
Query: 207 DYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 326
DY + + + LHLVL+L L++L +K C K CR
Sbjct: 92 DYGVSEGNILHLVLKL------SDLQVLDVKTTCGKH-CR 124
Score = 50.8 bits (116), Expect = 5e-07
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +3
Query: 12 HVFHRSNTMQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQ 182
H+ + + +Q+ VKT GK VE I VK +I K G + PD+Q +++ G++
Sbjct: 102 HLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEK 161
Query: 183 LEDGRTLSDYNIQKESTLHLVLR 251
LED ++D +S LHL++R
Sbjct: 162 LEDQSLINDICRNDDSVLHLLVR 184
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 54.4 bits (125), Expect = 4e-08
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 27 SNTMQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 203
S +Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +
Sbjct: 6 SKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAI 65
Query: 204 SDYNIQKESTLHLVLRLRGG 263
S Q ++T++LVL LRGG
Sbjct: 66 S----QPDATVNLVLSLRGG 81
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 209
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 210 YNIQKESTLHLVL 248
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +3
Query: 48 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 227
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 228 STLHLV 245
T+H+V
Sbjct: 82 HTIHMV 87
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 206
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 207 DYNIQKESTLHLVLRLRGG 263
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.8 bits (116), Expect = 5e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 216 IQKESTLHL 242
I ES L L
Sbjct: 61 ILFESRLLL 69
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +3
Query: 48 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 227
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 228 STLHLV 245
T+H+V
Sbjct: 82 HTVHMV 87
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/71 (30%), Positives = 45/71 (63%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 216 IQKESTLHLVL 248
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 HRSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 197
H S + +++G T+ + + SD+I VK +IQ G +Q+L+F+G++L +
Sbjct: 29 HYSVKSVLVFLSVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNAS 88
Query: 198 TLSDYNIQKESTLHLVLRL 254
+ DY + S LHLVL+L
Sbjct: 89 RVKDYGVTGGSVLHLVLKL 107
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 42 IFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYN 215
+ V T GK V+ + +K +I ++ +G P D Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 216 IQKESTLHLVLR 251
S +HL+++
Sbjct: 173 KDGNSVIHLLVK 184
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/74 (35%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +3
Query: 27 SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTL 203
++ ++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + L
Sbjct: 8 TDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRL 67
Query: 204 SDYNIQKESTLHLV 245
SDY++++ TL+LV
Sbjct: 68 SDYHVEEGHTLYLV 81
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 212
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 213 NIQKESTLHLVLRLRGGT--IEPSLRILAMKYNCEK 314
Q ++T++LVL LRGG + LR + MK +K
Sbjct: 67 --QSDTTMNLVLSLRGGKGGLGSLLRNVVMKAGQKK 100
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 216 IQKESTL 236
I ES L
Sbjct: 61 ILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 47.2 bits (107), Expect = 7e-06
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 216 IQKESTLHL 242
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 206
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 207 DYNIQKESTLHLVL 248
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 206
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 207 DYNIQKESTLHLVL 248
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 18 FHRSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DG 194
F+ + + +F+ T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ +
Sbjct: 27 FNLDDPILVFL-TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRND 85
Query: 195 RTLSDYNIQKESTLHLVLRL 254
+ DY + LHLV+RL
Sbjct: 86 SQIRDYGLADGKLLHLVIRL 105
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 15 VFHRSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFAGKQL 185
V S+ I V+T+ GK L VE S + VK +I KE GIP D + L G++L
Sbjct: 102 VIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEEL 160
Query: 186 EDGRTLSDYNIQKESTLHLVL 248
+D R ++D ++ +HL++
Sbjct: 161 DDQRLITDLCQNGDNVIHLLI 181
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Frame = +3
Query: 6 SKHVFHRS-----NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLI 167
S VFH + TM+I + L GK L V +++ ++KAK K + ++
Sbjct: 485 SLRVFHSAPAIKLQTMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMF 544
Query: 168 FAGKQLEDGRTLSDYNIQKESTLHLV 245
+ GK+LED ++L++ N+Q S +HL+
Sbjct: 545 YMGKELEDEKSLAEQNVQPNSLVHLL 570
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 206
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 207 DYNIQKESTLHLVL 248
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 206
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 207 DYNIQKESTLHLVL 248
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 206
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 207 DYNIQKESTLHLVL 248
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 33 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 209
+M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 660 SMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAA 719
Query: 210 YNIQKESTLHLV 245
N+Q S +HL+
Sbjct: 720 QNVQPNSLVHLI 731
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 206
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 207 DYNIQKESTLHLVL 248
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.0 bits (99), Expect = 6e-05
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 216 IQKESTLHL 242
I S + L
Sbjct: 61 ILNHSRIQL 69
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 216 IQKESTLHL 242
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/72 (31%), Positives = 42/72 (58%)
Frame = +3
Query: 30 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 209
+T+++ VK GK+I L V T++++K+++Q + P Q+LIF GK L + TL
Sbjct: 534 STIKLTVK-FGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQ 592
Query: 210 YNIQKESTLHLV 245
++ + L L+
Sbjct: 593 SDVGSGAKLMLM 604
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 215
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 216 IQKESTLHL 242
I+ S + L
Sbjct: 96 IRHNSRILL 104
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 149
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVE-ASDTIE 107
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 191
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 176
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 36 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 176
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 37.1 bits (82), Expect = 0.007
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 GKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 239
G+ + + V++ S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L
Sbjct: 715 GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILT 774
Query: 240 LVLRLRGG 263
L LR RGG
Sbjct: 775 LSLRERGG 782
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 78 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 191
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 39 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 200
++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 34.3 bits (75), Expect = 0.050
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 48 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 191
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +3
Query: 78 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 236
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At4g14940.1 68417.m02294 copper amine oxidase, putative highly
similar to copper amine oxidase [Arabidopsis thaliana]
gi|2654118|gb|AAB87690
Length = 650
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +3
Query: 18 FHRSNTMQIFVKTLTGKTITLEVEASDTI---ENVKAKIQDKEG 140
F+R ++ +F + + G T+T++V++ I + + I DKEG
Sbjct: 177 FYRDGSVNVFTRPIEGITVTIDVDSMQVIKYSDRFRKPIPDKEG 220
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 0.81
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +3
Query: 93 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 233
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 234 LHLVLRL 254
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 87 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 242
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g38340.1 68417.m05420 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 767
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +3
Query: 63 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 242
GK ++ ++ ++EN K K + ++ I D R FAG + + + +TL
Sbjct: 473 GKQVSFSFSSASSLENRKRKTKAEKDITLDTLRQHFAGSLKDAAKNIG----VCPTTLKR 528
Query: 243 VLRLRGGTIEPSLRILAMKYNCEKM 317
+ R G + PS +I + ++ K+
Sbjct: 529 ICRQNGISRWPSRKIKKVGHSLRKL 553
>At4g16070.1 68417.m02437 lipase class 3 family protein low
similarity to calmodulin-binding heat-shock protein
CaMBP [Nicotiana tabacum] GI:1087073; contains Pfam
profile PF01764: Lipase, PF03893: Lipase 3 N-terminal
region
Length = 654
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -2
Query: 422 ILDLLFGSQIVSVSALCLATVGSTRMKTGIAFTANHFLTVILHGENAKGRFNCTS 258
+L + Q SA C + M +A + HF+T I++G + F+ +S
Sbjct: 267 LLTYILREQKEFASATCFTFAPAACMTWDLAESGKHFITTIINGSDLVPTFSASS 321
>At3g47160.1 68416.m05120 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812; supporting cDNA
gi|25083983|gb|BT002136.1|
Length = 245
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 201 LSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNC 365
LS+ +I++E + + + + P NC +C KCY H R+ +C
Sbjct: 136 LSEIDIEREEECGICMEMNNMVVLP---------NCTHSLCIKCYRDWHGRSESC 181
>At3g46530.1 68416.m05051 disease resistance protein, RPP13-like
(CC-NBS class), putative domain signature CC-NBS exists,
suggestive of a disease resistance protein. Closest
homolog in Col-0 to RPP13.
Length = 835
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 170 KDETLLVWRNTFLVLDFSFDIFDSVGSFHLQ 78
+DE W LVLDF++D+ D + ++HL+
Sbjct: 54 EDEVSKEWSK--LVLDFAYDVEDVLDTYHLK 82
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 27.5 bits (58), Expect = 5.7
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +3
Query: 90 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 269
A +TIE++K +++D+E +++ A Q E + KE L L+ +L +
Sbjct: 154 AEETIESLKNQLKDRERALVLKEKDFEAKLQHEQEERKKEVEKAKEEQLSLINQL--NSA 211
Query: 270 EPSLRILAMKYNCEKMICRK 329
+ + L + + EK +C K
Sbjct: 212 KDLVTELGRELSSEKKLCEK 231
>At2g19180.1 68415.m02238 expressed protein
Length = 179
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 453 YNKFPIWLLFNP*SSFWV 400
+N P WL F P SSFWV
Sbjct: 73 HNSTPDWLPFAPGSSFWV 90
>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 941
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 170 CRETIRRWPHSFRL*HPERIHTSPGFE 250
C+ETI+ W H+ + + H PG E
Sbjct: 447 CKETIQEWHHAINVLNSPAGHKFPGME 473
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 57 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 194
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
>At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containing
protein low similarity to post-transcriptional control
of chloroplast gene expression CRP1 [Zea mays]
GI:3289002; contains Pfam profile PF01535: PPR repeat
Length = 855
Score = 27.1 bits (57), Expect = 7.6
Identities = 18/90 (20%), Positives = 43/90 (47%)
Frame = +3
Query: 93 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIE 272
+D++ + A I++ G+P Q + +++Y I +V + ++
Sbjct: 106 ADSVNHASAIIKEDVGVPIGDQIFKAGIGNVNLLSDIANYKIPLSDGTEVVGLPKSCMVD 165
Query: 273 PSLRILAMKYNCEKMICRKCYARLHPRATN 362
P+ I +K + K+I R+ A+++PR+ +
Sbjct: 166 PTRPISGVKSSNVKVIRREHLAKVYPRSAD 195
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,539,499
Number of Sequences: 28952
Number of extensions: 243906
Number of successful extensions: 844
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 947539968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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