Silkworm BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0021
         (749 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g77920.1 68414.m09080 bZIP family transcription factor contai...    28   7.6  
At1g67025.1 68414.m07621 hypothetical protein                          28   7.6  

>At1g77920.1 68414.m09080 bZIP family transcription factor contains
           Pfam profile: PF00170 bZIP transcription factor
          Length = 368

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 548 NKFLNYFKKITIASNTQIVYLNVTMWQLSERN*FTWI 438
           N + N F+  + A+   + YL   MW+ S    F WI
Sbjct: 195 NHYANLFQMKSDAAKADVFYLISGMWRTSTERFFQWI 231


>At1g67025.1 68414.m07621 hypothetical protein
          Length = 221

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -2

Query: 184 NNFNYYVNIINKSFFLLLFK-KNRTTRIIDASIVNLKCTNLSVHF 53
           NN N  + + N S  ++ F  +N+T  ++D S+   +C ++S++F
Sbjct: 41  NNQNLTLVLTNLSLQVISFDLENQTLTVVDESLFEGRCPSMSLNF 85


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,976,230
Number of Sequences: 28952
Number of extensions: 224874
Number of successful extensions: 357
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)