Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0075
(740 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g52960.1 68414.m05990 hypothetical protein very low similarit... 70 1e-12
At1g64410.1 68414.m07301 hypothetical protein 66 2e-11
At3g43350.1 68416.m04582 helicase-related low similarity to SP|Q... 63 2e-10
At2g05080.1 68415.m00530 hypothetical protein low similarity to ... 57 1e-08
At1g54430.1 68414.m06209 hypothetical protein 56 2e-08
At3g42100.1 68416.m04322 AT hook motif-containing protein-relate... 56 3e-08
At3g13250.1 68416.m01668 hypothetical protein low similarity to ... 55 6e-08
At3g30420.1 68416.m03847 hypothetical protein low similarity to ... 53 2e-07
At3g31980.1 68416.m04050 hypothetical protein low similarity to ... 50 1e-06
At3g30560.1 68416.m03867 hypothetical protein 45 6e-05
At3g42340.1 68416.m04375 hypothetical protein various predicted ... 36 0.021
At1g35940.1 68414.m04463 AT hook motif-containing protein-relate... 33 0.20
At4g03690.1 68417.m00504 hypothetical protein very low similarit... 33 0.26
At4g26380.1 68417.m03795 DC1 domain-containing protein contains ... 29 2.4
At1g29940.1 68414.m03658 DNA-directed RNA polymerase family prot... 29 3.2
At5g27830.1 68418.m03336 expressed protein 29 4.3
At5g23700.1 68418.m02778 hypothetical protein 29 4.3
At5g05010.1 68418.m00532 clathrin adaptor complexes medium subun... 29 4.3
At3g30520.1 68416.m03863 hypothetical protein 29 4.3
At2g45380.1 68415.m05645 expressed protein similar to gi2344899|... 29 4.3
At2g28070.1 68415.m03408 ABC transporter family protein 29 4.3
At5g01010.1 68418.m00001 expressed protein 28 7.5
At1g77240.1 68414.m08996 AMP-binding protein, putative strong si... 28 7.5
At5g65500.1 68418.m08240 protein kinase family protein contains ... 27 9.9
At5g40440.1 68418.m04904 mitogen-activated protein kinase kinase... 27 9.9
At3g08640.1 68416.m01003 alphavirus core protein family contains... 27 9.9
At2g31865.2 68415.m03893 poly (ADP-ribose) glycohydrolase (PARG)... 27 9.9
At2g31865.1 68415.m03892 poly (ADP-ribose) glycohydrolase (PARG)... 27 9.9
At1g44760.1 68414.m05128 universal stress protein (USP) family p... 27 9.9
>At1g52960.1 68414.m05990 hypothetical protein very low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 996
Score = 70.1 bits (164), Expect = 1e-12
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 20/190 (10%)
Frame = +1
Query: 211 VHDR--VFT--GSAGTGKSFLLKRIVAALPP--DVTMPTASTGVAACHI-GGTTLHAFAG 369
+HDR VF G GTGK+FL K + AA+ D+++ AS+G+AA + GG T H+ G
Sbjct: 560 LHDRGGVFFVYGFGGTGKTFLWKLLSAAIRSKGDISLNVASSGIAALLLDGGRTTHSRFG 619
Query: 370 IGDGSGSIENLCERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRKN--D 543
I + C + L + ++ +I DE M+ FE L+ R I N D
Sbjct: 620 IPINPNE-SSTCNISRGSDL-GELVKEANLIIWDETPMMSKHCFESLDRTLRDIMNNPGD 677
Query: 544 KPFGGIQLILCGDFLQLPPVVDKNKQKRFCF----QSHCWDKC--IELCFELKQV----- 690
KPFGG ++ GDF Q+ PV++ ++ F S+ W+ C +EL ++ +
Sbjct: 678 KPFGGKGIVFGGDFRQVLPVINGAGREEIVFAALNSSYIWEHCKVLELTKNMRLLANISE 737
Query: 691 HRQTDQEFIS 720
H + D E+ S
Sbjct: 738 HEKRDIEYFS 747
>At1g64410.1 68414.m07301 hypothetical protein
Length = 1231
Score = 66.5 bits (155), Expect = 2e-11
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Frame = +1
Query: 211 VHDR--VFT--GSAGTGKSFLLKRIVAALPP--DVTMPTASTGVAACHI-GGTTLHAFAG 369
+HDR VF G GTGK+FL K + AA+ D+++ AS+G+AA + GG T H+ G
Sbjct: 822 LHDRGGVFFVYGFGGTGKTFLWKLLSAAIRSKGDISLNVASSGIAALLLDGGRTAHSRFG 881
Query: 370 IGDGSGSIENLCERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRKN--D 543
I + C + + + ++ +I DE M+ FE L+ R I N D
Sbjct: 882 IPINPNE-SSTCNISRGLDF-GELVKEANLIIWDEAHMMSKHCFESLDRTLRDIMNNPGD 939
Query: 544 KPFGGIQLILCGDFLQLPPVVDKNKQKRFCF----QSHCWDKC 660
KPFGG ++ GDF Q+ V++ ++ F S+ W+ C
Sbjct: 940 KPFGGKVIVFGGDFRQVLSVINGAGREEIVFAALNSSYIWEHC 982
>At3g43350.1 68416.m04582 helicase-related low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 830
Score = 62.9 bits (146), Expect = 2e-10
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Frame = +1
Query: 211 VHDR--VFT--GSAGTGKSFLLKRIVAALPP--DVTMPTASTGVAACHI-GGTTLHAFAG 369
+HDR VF G GTGK+FL K + AA+ D+++ AS+G+AA + GG T H+
Sbjct: 192 LHDRGGVFFVYGFGGTGKTFLWKLLSAAVRSKGDISLNVASSGIAALRLDGGRTAHSRFD 251
Query: 370 IGDGSGSIENLCERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRKN--D 543
I + C + L + ++ K +I DE M+ FE L+ + I N D
Sbjct: 252 IPINPNE-SSTCNISRGSDL-GELVKEAKLIIWDEAPMMSKHCFESLDRTLKDIVNNPGD 309
Query: 544 KPFGGIQLILCGDFLQLPPVVDKNKQKRFCF----QSHCWD--KCIEL 669
KP GG ++ GDF Q+ PV++ ++ F S+ W+ K +EL
Sbjct: 310 KPLGGKVIVFGGDFRQVLPVINGAGREEIVFAALNSSYIWEHSKVLEL 357
>At2g05080.1 68415.m00530 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 1238
Score = 56.8 bits (131), Expect = 1e-08
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Frame = +1
Query: 232 GSAGTGKSFLLKRIVAALPP--DVTMPTASTGVAACHI-GGTTLHAFAGIGDGSGSIENL 402
G GTGK+FL K + AAL D+ + AS+G+A+ + GG T H+ +GI
Sbjct: 878 GFGGTGKTFLWKTLSAALRSKGDIVLNVASSGIASLLLEGGRTAHSRSGIPLNPNEFTTC 937
Query: 403 CERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRKN--DKPFGGIQLILC 576
+A A ++ +I DE M+ FE L+ I N +KPFGG ++
Sbjct: 938 NMKAGSDR--ANLVKEASLIIWDEAPMMSRHCFESLDRSLSDICGNCDNKPFGGKVVVFG 995
Query: 577 GDFLQLPPVV 606
GDF Q+ PV+
Sbjct: 996 GDFRQVLPVI 1005
>At1g54430.1 68414.m06209 hypothetical protein
Length = 1639
Score = 56.0 bits (129), Expect = 2e-08
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Frame = +1
Query: 232 GSAGTGKSFLLKRIVAALPPD--VTMPTASTGVAACHI-GGTTLHAFAGIGDGSGSIENL 402
G+ GTGK+FL K I++AL + MP AS+ +AA + GG T H+ I +++
Sbjct: 1178 GAGGTGKTFLYKTIISALRSNGKNVMPVASSAIAALLLPGGRTAHSRFKIPINVHE-DSI 1236
Query: 403 CERATKI-PLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHI------RKNDKPFGGI 561
C+ KI ++A K +I DE M FE ++ R I + K FGG
Sbjct: 1237 CD--IKIGSMLANVLSKVDLIIWDEAPMAHRHTFEAVDRTLRDILSVGDEKALTKTFGGK 1294
Query: 562 QLILCGDFLQLPPVVDKNKQKRFCF----QSHCWDKC 660
++L GDF Q+ PV+ + ++ +S+ W+ C
Sbjct: 1295 TVLLGGDFRQILPVIPQGTRQETVSAAINRSYLWESC 1331
>At3g42100.1 68416.m04322 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; weak hit to Pfam profile
PF02178: AT hook motif
Length = 1752
Score = 55.6 bits (128), Expect = 3e-08
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Frame = +1
Query: 232 GSAGTGKSFLLKRIVAALPP--DVTMPTASTGVAACHI-GGTTLHAFAGIGDGSGSIENL 402
G GTGK+F+ K + AA+ + + AS+G+A+ + GG T H+ I ++
Sbjct: 1299 GFGGTGKTFIWKTLAAAVRSRGQIVLNVASSGIASLLLEGGRTAHSRFAIPLNPDEF-SV 1357
Query: 403 CERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHI--RKNDKPFGGIQLILC 576
C+ K L A ++ +I DE M+ FE L+ I K++K FGG ++
Sbjct: 1358 CKITPKSDL-ANLIKEASLIIWDEAPMMSKFCFESLDKSFYDILNNKDNKVFGGKVVVFG 1416
Query: 577 GDFLQLPPVVDKNKQKRFCFQ----SHCWDKC 660
GDF Q+ PV++ + S+ WD C
Sbjct: 1417 GDFRQVLPVINGAGRVEIVMSSLNASYLWDHC 1448
>At3g13250.1 68416.m01668 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 1419
Score = 54.8 bits (126), Expect = 6e-08
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Frame = +1
Query: 232 GSAGTGKSFLLKRIVAALPP--DVTMPTASTGVAACHI-GGTTLHAFAGIGDGSGSIENL 402
G GTGK+F+ K + AA+ + + AS+G+A+ + GG T H+ I ++
Sbjct: 967 GFGGTGKTFIWKTLAAAVRSKGQICLNVASSGIASLLLEGGRTAHSRFSIPLNPDEF-SV 1025
Query: 403 CERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHI--RKNDKPFGGIQLILC 576
C+ K L A ++ +I DE M+ FE L+ I R ++K FGG ++
Sbjct: 1026 CKIKPKSDL-ADLIKEASLIIWDEAPMMSKFCFEALDKSFSDIIKRVDNKVFGGKVMVFG 1084
Query: 577 GDFLQLPPVVDKNKQKRFCFQ----SHCWDKC 660
GDF Q+ PV++ + S+ WD C
Sbjct: 1085 GDFRQVLPVINGAGRAEIVMSSLNASYLWDHC 1116
>At3g30420.1 68416.m03847 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 837
Score = 53.2 bits (122), Expect = 2e-07
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Frame = +1
Query: 232 GSAGTGKSFLLKRIVAALPPD--VTMPTASTGVAACHI-GGTTLHAFAGIGDGSGSIENL 402
G GTGK+FL K I++AL + MP AS+ +AA + GG T H++ I + +
Sbjct: 376 GDGGTGKTFLYKTIISALRSNGKNVMPVASSAIAALLLPGGRTAHSWFKIPINVHE-DFI 434
Query: 403 CERATKI-PLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHI------RKNDKPFGGI 561
C+ KI ++A K +I DE M FE ++ R I + K GG
Sbjct: 435 CD--IKIGSMLANVLSKVDLIIWDEAPMAHRHTFEAVDRTLRDILSVGDEKALTKTLGGK 492
Query: 562 QLILCGDFLQLPPVVDKNKQKRFCF----QSHCWDKC 660
++L GDF Q+ PV+ + ++ +S+ W+ C
Sbjct: 493 TVLLGGDFRQILPVIPQRTRQETVSAAINRSYLWESC 529
>At3g31980.1 68416.m04050 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 1099
Score = 50.4 bits (115), Expect = 1e-06
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Frame = +1
Query: 232 GSAGTGKSFLLKRIVAALPPD--VTMPTASTGVAACHI-GGTTLHAFAGIGDGSGSIENL 402
G GT K+F+ K + AA+ +++ AS+G+A+ + GG T H+ GI
Sbjct: 645 GFGGTSKTFMWKTLSAAVRMRGLISVNVASSGIASLLLQGGRTAHSRFGIPINPDDFTT- 703
Query: 403 CERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRKN--DKPFGGIQLILC 576
C L A ++ +I DE M+ FE L+ + N KPFGG ++
Sbjct: 704 CHIVPNSDL-ANMLKEASLIIWDEAPMMSRYCFESLDRSLNDVIGNIDGKPFGGKVVVFG 762
Query: 577 GDFLQLPPVVDKNKQKRFCF----QSHCWDKC 660
GDF Q+ PV+ + S+ W+ C
Sbjct: 763 GDFRQVLPVIHGAGRAEIVLAALNSSYLWEHC 794
>At3g30560.1 68416.m03867 hypothetical protein
Length = 1473
Score = 44.8 bits (101), Expect = 6e-05
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Frame = +1
Query: 292 DVTMPTASTGVAACHI-GGTTLHAFAGIG--DGSGSIENLCERATKIPLVAQKWRKCKHL 462
D+ + AS+G+A+ + GG T H+ GI S N+ ER + + A+ K +
Sbjct: 1046 DICLNVASSGIASLLLEGGRTAHSRFGIPLTPHETSTCNM-ERGSDL---AELVTAAKLI 1101
Query: 463 IIDEISMVDGIFFEKLEAVARHIRKN--DKPFGGIQLILCGDFLQLPPVVDKNKQ----K 624
I DE M+ FE L+ + I D PFGG +I GDF Q+ PV+ + K
Sbjct: 1102 IWDEAPMMSKYCFESLDKSLKDILSTPEDMPFGGKLIIFGGDFRQILPVILAAGRELIVK 1161
Query: 625 RFCFQSHCWDKC 660
SH W C
Sbjct: 1162 SSLNSSHLWQYC 1173
>At3g42340.1 68416.m04375 hypothetical protein various predicted
Helicases, Arabidopsis thaliana
Length = 244
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Frame = +1
Query: 499 FEKLEAVARHIRKN--DKPFGGIQLILCGDFLQLPPVVDKNKQKRFCF----QSHCWDKC 660
FE L+ R N DKPFGG ++ GDF Q+ V++ ++ F S+ W+ C
Sbjct: 7 FESLDRTLRDFMNNLEDKPFGGKVIVFGGDFRQVLLVINGAGREEIVFAALNSSYIWEHC 66
Query: 661 --IELCFELKQVHRQTDQE 711
EL ++K + ++ E
Sbjct: 67 KVFELTKKMKLLANISEHE 85
>At1g35940.1 68414.m04463 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; contains weak hit to
PF02178: AT hook motif
Length = 1678
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +1
Query: 232 GSAGTGKSFLLKRIVAAL--PPDVTMPTASTGVAACHI-GGTTLHAFAGI 372
G GTGK+F+ K + AA+ + + AS+G+A+ + GG T H+ GI
Sbjct: 1258 GFGGTGKTFIWKTLSAAIRCRGQIVLNVASSGIASLLLEGGRTAHSRFGI 1307
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +1
Query: 538 NDKPFGGIQLILCGDFLQLPPVVDKNKQKRFCFQ----SHCWDKC 660
N+K FGG ++ GDF Q+ PV++ + S+ WD C
Sbjct: 1330 NNKVFGGKVVVFGGDFRQVLPVINGAGRAEIVMSSLNASYLWDHC 1374
>At4g03690.1 68417.m00504 hypothetical protein very low similarity
to SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 570
Score = 32.7 bits (71), Expect = 0.26
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 340 GGTTLHAFAGIGDGSGSIENLCERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAV 519
GG T H+ GI + + C I L A+ K +I DE M+ F+ L+
Sbjct: 258 GGRTAHSRFGI-PLTPHETSTCNIERGIDL-AELVTAAKLIIWDEAPMMSKYCFKSLDKR 315
Query: 520 ARHI--RKNDKPFGGIQLILCGDFLQLPPVV 606
R I DKP GG ++ GDF Q+ V+
Sbjct: 316 LRDIISTPEDKPLGGKVILFGGDFRQILHVI 346
>At4g26380.1 68417.m03795 DC1 domain-containing protein contains Pfam
profile PF03107: DC1 domain
Length = 1016
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 216 RPGFHWLCRNRKKFLIK 266
RPG W+C N KK LIK
Sbjct: 973 RPGSSWICFNNKKILIK 989
>At1g29940.1 68414.m03658 DNA-directed RNA polymerase family protein
similar to SP|P22138 DNA-directed RNA polymerase I 135
kDa polypeptide (EC 2.7.7.6) (RNA polymerase I subunit
2) {Saccharomyces cerevisiae}; contains Pfam profiles
PF04563; RNA polymerase beta subunit, PF04560: RNA
polymerase Rpb2 domain 7, PF04561: RNA polymerase Rpb2
domain 2, PF04565: RNA polymerase Rpb2 domain 3,
PF00562: RNA polymerase Rpb2 domain 6
Length = 1114
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 436 QKW-RKCKHLIIDEISMVDGIF-FEKLEAVARHIRKN 540
++W RKCK L+ DE+ + F FE L V + I KN
Sbjct: 329 EEWLRKCKSLLKDELDNTNSKFSFESLADVKKLINKN 365
>At5g27830.1 68418.m03336 expressed protein
Length = 300
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 337 CDKLRPQWMQWASLHQEVKLPQSFLIRNFFLFLQSQ*KPGRGRACGAHSACCGSRLRGS 161
C K QW++ + Q++ L SFLI FL QS + + R RLRG+
Sbjct: 227 CFKDLLQWVREMTTIQKISLGMSFLIAGMFLIRQSNNRNQKQRLAAIQRT--ARRLRGN 283
>At5g23700.1 68418.m02778 hypothetical protein
Length = 572
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 112 RGP*SATYGRARSKSSNSPADETHSTQSAHRKPV 213
R P S YGR S+SSN + S AHR +
Sbjct: 4 RRPSSPVYGRQWSRSSNGTESRSPSMSPAHRNQI 37
>At5g05010.1 68418.m00532 clathrin adaptor complexes medium
subunit-related contains pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 527
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 3 GGGERVAPGAGFGPRRSISPAVTQRERRSDASVT 104
GGG G+GFG + P T+ + RS +SVT
Sbjct: 202 GGGGGYGSGSGFGMISDVDPINTKPKDRSRSSVT 235
>At3g30520.1 68416.m03863 hypothetical protein
Length = 397
Score = 28.7 bits (61), Expect = 4.3
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +3
Query: 3 GGGERVAPGAGFG-PRRSISPAVTQRERRSDASVTIAQRPVIRHLRTRPVEVQQLPRRRD 179
GG RV+ G+G G RR S T ++ S S QR + LR R + +
Sbjct: 192 GGTSRVSIGSGSGGSRRRQSFETTIQD--SITSFGEFQRQSFQQLRPRAFDQDDYDEFKK 249
Query: 180 PQHAECAPQARPRPGFHWLCRNRKKFLI 263
+ A FHW C N K L+
Sbjct: 250 AEAIFTALDLPKHTRFHWACINALKELV 277
>At2g45380.1 68415.m05645 expressed protein similar to
gi2344899|AC002388
Length = 491
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 478 SMVDGIFFEKLEAVARHIRKNDKPFGG 558
S + G F + L+ V R IRK PFGG
Sbjct: 197 SGISGFFSDSLKEVKRGIRKMGDPFGG 223
>At2g28070.1 68415.m03408 ABC transporter family protein
Length = 730
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +1
Query: 151 KSSNSPADETHSTQSAHRKPVHDRVFTGSAGTGKSFLLKRIVAALPPDVTM 303
K +D+ + + + P V G A +GKS LL+ + LPP M
Sbjct: 124 KGKRKYSDKVVKSSNGYAFPGTMTVIMGPAKSGKSTLLRALAGRLPPSAKM 174
>At5g01010.1 68418.m00001 expressed protein
Length = 409
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 370 IGDGSGSIENLCERATKIPLVAQKWRKCKHLIIDEISMVDGIFFEKLEAVARHIRKNDKP 549
I D G +E ER + V+QKW K + ++ E ++V FE+ + N P
Sbjct: 228 INDDDGPMEEQRERYGPLYTVSQKWSKDQMNLLSEAAIVYTSEFERFVTFISDVFAN-SP 286
Query: 550 F 552
F
Sbjct: 287 F 287
>At1g77240.1 68414.m08996 AMP-binding protein, putative strong
similarity to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 545
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = -1
Query: 521 ATASNFSKNIPST-IDISSIIRCL---HFLHFCATNGILVALSHKFSIDPLPSPMPAKA* 354
ATA+ ++NI T +D+ +I + H CA +L L++ + PL SP+
Sbjct: 246 ATAAVGARNICVTRVDVPTIFNLIDKYQVTHMCAAPMVLNMLTNHPAQKPLQSPVKVMTA 305
Query: 353 RVVPPM*QAATPVDAVGIVTSGGKAAT 273
PP + +A+G S G T
Sbjct: 306 GAPPPA-TVISKAEALGFDVSHGYGMT 331
>At5g65500.1 68418.m08240 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 765
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 649 NNGIENKISSVYSCPLLVVVVRNHH 575
+ G N I SV+ CP+L V++N H
Sbjct: 682 DEGDPNDIPSVFMCPILQEVMKNPH 706
>At5g40440.1 68418.m04904 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK3) similar to NPK2 [Nicotiana
tabacum] gi|862342|dbj|BAA06731; mitogen-activated
protein kinase kinase (MAPKK) family, PMID:12119167
Length = 520
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = +1
Query: 151 KSSNSPADETHSTQSAHRKPVHDRVFTGSAGTGKSFLLKRIV 276
K ++S DE+ S+++ ++ H+ G+ G+G S +++R +
Sbjct: 60 KCTSSHVDESESSETTYQCASHEMRVFGAIGSGASSVVQRAI 101
>At3g08640.1 68416.m01003 alphavirus core protein family contains
Pfam profile: PF00944 alphavirus core protein
Length = 337
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 614 INRRDFVFNPIVGISVLNFVL 676
+N DFVF+ +V S+LNFVL
Sbjct: 146 LNELDFVFSTLVVGSILNFVL 166
>At2g31865.2 68415.m03893 poly (ADP-ribose) glycohydrolase (PARG)
family protein contains Pfam profile: PF05028 poly
(ADP-ribose) glycohydrolase (PARG)
Length = 532
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 490 GIFFEKLEAVARHIRKNDKPFGGIQLILCGDFLQLPPVVDKNKQK 624
G+FF+K ++R N FG + LC LQLP +++K+ QK
Sbjct: 78 GLFFDK--KISREESANF--FGEVVPALCRLLLQLPSMLEKHYQK 118
>At2g31865.1 68415.m03892 poly (ADP-ribose) glycohydrolase (PARG)
family protein contains Pfam profile: PF05028 poly
(ADP-ribose) glycohydrolase (PARG)
Length = 522
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 490 GIFFEKLEAVARHIRKNDKPFGGIQLILCGDFLQLPPVVDKNKQK 624
G+FF+K ++R N FG + LC LQLP +++K+ QK
Sbjct: 78 GLFFDK--KISREESANF--FGEVVPALCRLLLQLPSMLEKHYQK 118
>At1g44760.1 68414.m05128 universal stress protein (USP) family
protein contains Pfam profile PF00582: universal stress
protein family
Length = 213
Score = 27.5 bits (58), Expect = 9.9
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Frame = -1
Query: 503 SKNIPSTIDISSIIRCLHFLHFCATN----GILVALSHKFSIDPLPSPMPAKA*RVVPPM 336
SK + +D SS R H + + T+ G LV L H S D +P A++ + +
Sbjct: 62 SKRVMVVVDESS--RSKHAMMWALTHLTNKGDLVTLLHVVSPDDEATPSLAQS---LGSL 116
Query: 335 *QAATP-VDAVGIVTSGGKAATILFNKKLFPVPAEPVKTRSWTGLRCALC 189
+A P VD +V G K AT+L K V + + L LC
Sbjct: 117 CKACKPEVDVEALVIQGPKLATVLSQVKKLEVSVLVLGQKKSAPLISCLC 166
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,493,866
Number of Sequences: 28952
Number of extensions: 411109
Number of successful extensions: 1435
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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