Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A14
(843 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19600.1 68417.m02880 cyclin family protein similar to cyclin... 102 3e-22
At5g45190.1 68418.m05547 cyclin family protein similar to cyclin... 99 2e-21
At1g27630.1 68414.m03375 cyclin family protein similar to cyclin... 76 3e-14
At2g26430.1 68415.m03171 ania-6a type cyclin (RCY1) nearly ident... 73 2e-13
At4g19560.1 68417.m02876 cyclin family protein similar to SP|O88... 69 4e-12
At1g35440.1 68414.m04396 cyclin family protein similar to SP|O75... 66 2e-11
At5g48640.1 68418.m06015 cyclin family protein similar to SP|P55... 40 0.002
At5g48630.1 68418.m06014 cyclin family protein similar to SP|P55... 39 0.005
At2g23300.1 68415.m02781 leucine-rich repeat transmembrane prote... 32 0.55
At3g61820.1 68416.m06939 aspartyl protease family protein contai... 29 5.1
At2g29580.1 68415.m03592 zinc finger (CCCH-type) family protein ... 28 8.9
>At4g19600.1 68417.m02880 cyclin family protein similar to cyclin
T2a [Homo sapiens] GI:2981198; contains Pfam profile
PF00134: Cyclin, N-terminal domain
Length = 541
Score = 102 bits (244), Expect = 3e-22
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 4/162 (2%)
Frame = +2
Query: 32 KWYFTKEQLQ-NSPSRKCGLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIVYMHRF 208
+WYF +++++ NSPSR +D KE R+ +QD+G RL+V Q+ I TAI++ HRF
Sbjct: 32 RWYFGRKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRF 91
Query: 209 YAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNA--LTPEQYQ 382
+ S + R KVEE PR L+ VI V++ +H+ + A + ++
Sbjct: 92 FIRQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKKDPTTAQKIKQKEVY 151
Query: 383 EQAQDLVFN-ENVLLQTLGFDVAIDHPHTHVVRTCHLXKSDQ 505
EQ ++L+ N E ++L TLGFD + HP+ +V K Q
Sbjct: 152 EQQKELILNGEKIVLSTLGFDFNVYHPYKPLVEAIKKFKVAQ 193
Score = 35.5 bits (78), Expect = 0.044
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 459 PTRTLCERVTLXKATKD-LAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWL 635
P + L E + K ++ LAQ ++ ++ L T++CLQ+ P +A I LA+K+
Sbjct: 178 PYKPLVEAIKKFKVAQNALAQVAWNFVNDGLR-TSLCLQFKPHHIAAGAIFLAAKFLKVK 236
Query: 636 IPQSYEGRHWFSYVDKT 686
+P E + W+ D T
Sbjct: 237 LPSDGE-KVWWQEFDVT 252
>At5g45190.1 68418.m05547 cyclin family protein similar to cyclin T1
[Equus caballus] GI:5052355; contains Pfam profile
PF00134: Cyclin, N-terminal domain
Length = 579
Score = 99 bits (238), Expect = 2e-21
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Frame = +2
Query: 32 KWYFTKEQLQ-NSPSRKCGLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIVYMHRF 208
+WYF +++++ NSPSR G+D KE R+ +QD+G RL+V Q+ I TAI++ HRF
Sbjct: 32 RWYFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRF 91
Query: 209 YAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHR---GEGVNALTPEQY 379
+ S + R KVEE PR L+ VI V++ +++ G E Y
Sbjct: 92 FFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKDPGASQKIKQKEVY 151
Query: 380 QEQAQDLVFNENVLLQTLGFDVAIDHPHTHVVRTCHLXKSDQ 505
++Q + ++ E ++L TLGFD+ + HP+ +V K Q
Sbjct: 152 EQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQ 193
Score = 35.5 bits (78), Expect = 0.044
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 459 PTRTLCERVTLXKATKD-LAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWL 635
P + L E + K ++ LAQ ++ ++ L T++CLQ+ P +A I LA+K+
Sbjct: 178 PYKPLVEAIKKFKVAQNALAQVAWNFVNDGLR-TSLCLQFKPHHIAAGAIFLAAKFLKVK 236
Query: 636 IPQSYEGRHWFSYVDKT 686
+P E + W+ D T
Sbjct: 237 LPSDGE-KVWWQEFDVT 252
>At1g27630.1 68414.m03375 cyclin family protein similar to cyclin T1
[Homo sapiens] GI:2981196; contains Pfam profile
PF00134: Cyclin, N-terminal domain
Length = 317
Score = 76.2 bits (179), Expect = 3e-14
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Frame = +2
Query: 32 KWYFTKEQLQN-SPSRKCGLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIVYMHRF 208
KWYF++E+++ SPSRK G+D KE R +Q +G +L VSQ+ I+ A+V HRF
Sbjct: 33 KWYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRF 92
Query: 209 YAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGE---GVNALTPEQY 379
Y S + K E++P +L V+ ++ ++ + + E Y
Sbjct: 93 YMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRIHQTECY 152
Query: 380 QEQAQDLVFNENVLLQTLGFDVAIDHPH 463
E + ++ E++LL T F + I+ P+
Sbjct: 153 HEFKEIILSGESLLLSTSAFHLDIELPY 180
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 459 PTRTLCERVTLXKATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSN 629
P + L + A DLA ++ + + TT+CLQY P V+A +HLA+ + N
Sbjct: 179 PYKPLAAALNRLNAWPDLATAAWNFVHDWIR-TTLCLQYKPHVIATATVHLAATFQN 234
>At2g26430.1 68415.m03171 ania-6a type cyclin (RCY1) nearly
identical to ania-6a type cyclin [Arabidopsis thaliana]
GI:13924511
Length = 416
Score = 73.3 bits (172), Expect = 2e-13
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Frame = +2
Query: 29 EKWYFTKEQLQNSPSRKCGLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIVYMHRF 208
+ +Y + EQL+ SPSRK G+D E++ R +LIQ+ G L++ Q + T V RF
Sbjct: 7 DNFYLSDEQLKASPSRKDGIDETTEISLRIYGCDLIQEGGILLKLPQAVMATGQVLFQRF 66
Query: 209 YAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNA----LTPEQ 376
Y S +F K+EE P+K VI V H R E + + ++
Sbjct: 67 YCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENLPLEHLDMYAKK 126
Query: 377 YQEQAQDLVFNENVLLQTLGFDVAIDHPHTHV 472
+ E +L E +L+ +GF ++HPH +
Sbjct: 127 FSELKVELSRTERHILKEMGFVCHVEHPHKFI 158
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/63 (23%), Positives = 36/63 (57%)
Frame = +3
Query: 459 PTRTLCERVTLXKATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWLI 638
P + + + + +L Q ++ +A++SL TT+C+++ VVAC ++ A++ +
Sbjct: 154 PHKFISNYLATLETPPELRQEAWNLANDSLR-TTLCVRFRSEVVACGVVYAAARRFQVPL 212
Query: 639 PQS 647
P++
Sbjct: 213 PEN 215
>At4g19560.1 68417.m02876 cyclin family protein similar to SP|O88874
Cyclin K (Fragment) {Mus musculus}; contains Pfam
profile PF00134: Cyclin, N-terminal domain
Length = 474
Score = 68.9 bits (161), Expect = 4e-12
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Frame = +2
Query: 35 WYFTKEQLQ-NSPSRKCGLDADKELAYRQQAANLIQDMGQRLQVS--QLCINTAIVYMHR 205
W+F++E+++ NSPSR+ G+D E R ++ +G+RL++S + + +
Sbjct: 31 WFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKMSLPDFIHDKTVCDRDQ 90
Query: 206 FYAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALTPEQYQE 385
F F KVEE P LE VI ++ +H+ + A E Y +
Sbjct: 91 ALCFFPFGSMCMTIATVCMLLAG-KVEETPVTLEDVIIASYERIHKKDLAGAQRKEVYDQ 149
Query: 386 QAQDLVFNENVLLQTLGFDVAIDHPHTHVV 475
Q + ++ E ++L TL FD+ I HP+ +V
Sbjct: 150 QKELVLIGEELVLSTLNFDLCISHPYKPLV 179
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 498 ATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASK 620
A LAQ ++ ++ L TT+CLQY P +A I LA++
Sbjct: 190 AKTQLAQFAWNFVNDCLR-TTLCLQYQPHHIAAGAILLAAE 229
>At1g35440.1 68414.m04396 cyclin family protein similar to SP|O75909
Cyclin K {Homo sapiens}; contains Pfam profile PF00134:
Cyclin, N-terminal domain
Length = 247
Score = 66.5 bits (155), Expect = 2e-11
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Frame = +2
Query: 29 EKWYFTKEQLQN-SPSRKCGLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIVYMHR 205
+ WY T+E ++ SPSR G++ +E R + +Q++GQRL Q I TAIV R
Sbjct: 5 KNWYNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQR 64
Query: 206 FYAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALTPEQYQE 385
F+ S T+ KVE PR V+ V++ L E + + ++
Sbjct: 65 FFTRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFNKEPLR----DVFER 120
Query: 386 QAQDLVFNENVLLQTLGFDVAIDHPHTHVV 475
++ E ++L TL D+ I+HP+ V+
Sbjct: 121 LKMTVLTGEKLVLSTLECDLEIEHPYKLVM 150
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 510 LAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWLIPQSYEGRHWFSY-VDKT 686
L Q ++ ++SL T++CLQ+ P+ +A I++ +P + W + V K
Sbjct: 165 LCQAAFNFVNDSLR-TSLCLQFGPSQIASAAIYIGLSMCKMTLPCDGDKAWWREFDVTKR 223
Query: 687 VXW 695
W
Sbjct: 224 QLW 226
>At5g48640.1 68418.m06015 cyclin family protein similar to SP|P55168
Cyclin C {Gallus gallus}; contains Pfam profile PF00134:
Cyclin, N-terminal domain
Length = 253
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Frame = +2
Query: 83 GLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIVYMHRFYAFHSFTQFHRNXXXXXX 262
G+ D + +N I + Q ++V Q + TAI YM R Y S +F
Sbjct: 31 GISIDDFKLIKFHMSNHIMKLAQHIKVRQRVVATAITYMRRVYIRKSMVEFEPRLVALTC 90
Query: 263 XXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALTPEQYQE-QAQDLVFNENVLLQTLGF 439
K EE +++ ++ + + L P++Y + + +D++ E +L+ L +
Sbjct: 91 LYLASKAEES------IVQARNLVFY----IKRLYPDEYNKYELKDILGMEMKVLEALDY 140
Query: 440 DVAIDHPH 463
+ + HP+
Sbjct: 141 YLVVFHPY 148
>At5g48630.1 68418.m06014 cyclin family protein similar to SP|P55168
Cyclin C {Gallus gallus}; contains Pfam profile PF00134:
Cyclin, N-terminal domain
Length = 253
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/127 (21%), Positives = 51/127 (40%)
Frame = +2
Query: 83 GLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIVYMHRFYAFHSFTQFHRNXXXXXX 262
G+ + + +N I + Q +++ Q + TA+ YM R Y S T++
Sbjct: 31 GISVEDFRLIKLHMSNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTC 90
Query: 263 XXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALTPEQYQEQAQDLVFNENVLLQTLGFD 442
K EE V H L E+++ + +D++ E +L+ L F
Sbjct: 91 LYLACKAEE---------SVVHAKLLVFYMKKLYADEKFRYEIKDILEMEMKVLEALNFY 141
Query: 443 VAIDHPH 463
+ + HP+
Sbjct: 142 LVVFHPY 148
>At2g23300.1 68415.m02781 leucine-rich repeat transmembrane protein
kinase, putative
Length = 773
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -2
Query: 500 RFXQGDTFAQRACGGGRSLHRNLMSVAERSR*TQGPAPAPDTVQVSERSP 351
R GDT RA G R ++ + R T GP P+P V SP
Sbjct: 605 RLLAGDTSYNRASGSSRIFSSKRLTASSREFGTIGPTPSPSPSSVGPISP 654
>At3g61820.1 68416.m06939 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 483
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 438 SM*RSTTPTRTLCERVTLXKATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCI-HLA 614
S+ R T P ATK SY + L+ M PTVV F ++
Sbjct: 368 SVTRLTQPAYVALRDAFRLGATKLKRAPSYSLFDTCFDLSGMTTVKVPTVVFHFGGGEVS 427
Query: 615 SKWSNWLIPQSYEGRHWFSY 674
SN+LIP + EGR F++
Sbjct: 428 LPASNYLIPVNTEGRFCFAF 447
>At2g29580.1 68415.m03592 zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|O59800 Cell cycle control protein cwf5
{Schizosaccharomyces pombe}; contains Pfam profile:
PF00076 RNA recognition motif (aka RRM, RBD, or RNP
domain)
Length = 483
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 647 RLWDKPITPFRGQMYTETRYNRRXVLQTHCCQMETV 540
++ +P T FR + + RY + V QT CC+++ V
Sbjct: 45 KICTRPFTVFRWRPGRDARYKKTEVCQT-CCKLKNV 79
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,502,093
Number of Sequences: 28952
Number of extensions: 367617
Number of successful extensions: 863
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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