Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30011
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 103 1e-22
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 103 1e-22
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 103 1e-22
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 103 1e-22
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 103 1e-22
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 80 1e-15
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 80 1e-15
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 80 1e-15
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 76 3e-14
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 49 4e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 45 7e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 44 9e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 44 9e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 40 0.001
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 40 0.001
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 40 0.001
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 40 0.001
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 40 0.002
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 40 0.002
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 38 0.006
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 38 0.006
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.008
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 37 0.014
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 37 0.018
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 37 0.018
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 37 0.018
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 37 0.018
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 36 0.024
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 36 0.024
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 36 0.024
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 36 0.024
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 36 0.024
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 36 0.024
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 36 0.024
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 36 0.024
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 36 0.024
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 36 0.024
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 36 0.032
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 36 0.042
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 35 0.055
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 35 0.073
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 35 0.073
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 34 0.096
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 33 0.22
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 33 0.29
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 33 0.29
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.51
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.51
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 31 0.68
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 31 0.68
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 31 0.68
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 31 0.68
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 31 0.68
Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical p... 31 0.90
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 31 1.2
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 31 1.2
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 30 1.6
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 30 2.1
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 30 2.1
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 30 2.1
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 30 2.1
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 30 2.1
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 30 2.1
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 29 3.6
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 29 3.6
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 29 3.6
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 28 6.3
U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical pr... 28 8.4
AC087081-13|AAK66033.1| 253|Caenorhabditis elegans Hypothetical... 28 8.4
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 25 8.9
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 103 bits (247), Expect = 1e-22
Identities = 44/85 (51%), Positives = 65/85 (76%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRAVPR++
Sbjct: 46 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 105
Query: 435 RPEASATVKKLFVAGLKQDIEEEDL 509
R E++ + K+L+V+G+++D E+ L
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDML 130
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 491 H*RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
H L EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ LQ++H +
Sbjct: 125 HTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMV 179
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
+RE++S FG I + V+ D T + RGFGFV F VD Q+ H I
Sbjct: 39 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHII 88
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 154 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFY-EHGE 261
SGD EPE+ RK+F+GGL TTD ++EFY + GE
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGE 48
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/63 (20%), Positives = 35/63 (55%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+G + ++ D T++ +GFGF+T+ VD+ + H ++G + ++ + ++E+
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMS 196
Query: 435 RPE 443
+ +
Sbjct: 197 KAQ 199
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 103 bits (247), Expect = 1e-22
Identities = 44/85 (51%), Positives = 65/85 (76%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRAVPR++
Sbjct: 8 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 67
Query: 435 RPEASATVKKLFVAGLKQDIEEEDL 509
R E++ + K+L+V+G+++D E+ L
Sbjct: 68 RSESNVSTKRLYVSGVREDHTEDML 92
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 491 H*RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
H L EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ LQ++H +
Sbjct: 87 HTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMV 141
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
+RE++S FG I + V+ D T + RGFGFV F VD Q+ H I
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHII 50
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/63 (20%), Positives = 35/63 (55%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+G + ++ D T++ +GFGF+T+ VD+ + H ++G + ++ + ++E+
Sbjct: 99 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMS 158
Query: 435 RPE 443
+ +
Sbjct: 159 KAQ 161
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 103 bits (247), Expect = 1e-22
Identities = 44/85 (51%), Positives = 65/85 (76%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRAVPR++
Sbjct: 8 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 67
Query: 435 RPEASATVKKLFVAGLKQDIEEEDL 509
R E++ + K+L+V+G+++D E+ L
Sbjct: 68 RSESNVSTKRLYVSGVREDHTEDML 92
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 491 H*RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
H L EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ LQ++H +
Sbjct: 87 HTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMV 141
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
+RE++S FG I + V+ D T + RGFGFV F VD Q+ H I
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHII 50
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/63 (20%), Positives = 35/63 (55%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+G + ++ D T++ +GFGF+T+ VD+ + H ++G + ++ + ++E+
Sbjct: 99 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMS 158
Query: 435 RPE 443
+ +
Sbjct: 159 KAQ 161
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 103 bits (247), Expect = 1e-22
Identities = 44/85 (51%), Positives = 65/85 (76%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRAVPR++
Sbjct: 46 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 105
Query: 435 RPEASATVKKLFVAGLKQDIEEEDL 509
R E++ + K+L+V+G+++D E+ L
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDML 130
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 491 H*RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
H L EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ LQ++H +
Sbjct: 125 HTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMV 179
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
+RE++S FG I + V+ D T + RGFGFV F VD Q+ H I
Sbjct: 39 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHII 88
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 154 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFY-EHGE 261
SGD EPE+ RK+F+GGL TTD ++EFY + GE
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGE 48
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/63 (20%), Positives = 35/63 (55%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+G + ++ D T++ +GFGF+T+ VD+ + H ++G + ++ + ++E+
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMS 196
Query: 435 RPE 443
+ +
Sbjct: 197 KAQ 199
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 103 bits (247), Expect = 1e-22
Identities = 44/85 (51%), Positives = 65/85 (76%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRAVPR++
Sbjct: 46 FGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKN 105
Query: 435 RPEASATVKKLFVAGLKQDIEEEDL 509
R E++ + K+L+V+G+++D E+ L
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDML 130
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 491 H*RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
H L EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ LQ++H +
Sbjct: 125 HTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMV 179
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
+RE++S FG I + V+ D T + RGFGFV F VD Q+ H I
Sbjct: 39 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHII 88
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 154 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFY-EHGE 261
SGD EPE+ RK+F+GGL TTD ++EFY + GE
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGE 48
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/63 (20%), Positives = 35/63 (55%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+G + ++ D T++ +GFGF+T+ VD+ + H ++G + ++ + ++E+
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMS 196
Query: 435 RPE 443
+ +
Sbjct: 197 KAQ 199
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 80.2 bits (189), Expect = 1e-15
Identities = 29/59 (49%), Positives = 45/59 (76%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 431
WG +VD +V++DP TK S+GFGF+T++ + A N+RPHK+ G+ V+ KRA+PRE++
Sbjct: 72 WGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQM 130
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
LR YF TFG + V ++ G+ RG GFV ++D + DR CL N
Sbjct: 164 LRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CLAHN 204
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 503 RLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+L YFS +G +V V+ D T RGFGFV F
Sbjct: 64 QLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 97
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 166 YEEPEHTRKLFIGGLDYRTTDSSLKEFY 249
++ P RKLFIGGL + TTD L ++
Sbjct: 42 HDSPPQLRKLFIGGLSHDTTDEQLGNYF 69
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 80.2 bits (189), Expect = 1e-15
Identities = 29/59 (49%), Positives = 45/59 (76%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 431
WG +VD +V++DP TK S+GFGF+T++ + A N+RPHK+ G+ V+ KRA+PRE++
Sbjct: 92 WGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQM 150
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
LR YF TFG + V ++ G+ RG GFV ++D + DR CL N
Sbjct: 184 LRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CLAHN 224
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 503 RLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+L YFS +G +V V+ D T RGFGFV F
Sbjct: 84 QLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 117
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 166 YEEPEHTRKLFIGGLDYRTTDSSLKEFY 249
++ P RKLFIGGL + TTD L ++
Sbjct: 62 HDSPPQLRKLFIGGLSHDTTDEQLGNYF 89
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 80.2 bits (189), Expect = 1e-15
Identities = 29/59 (49%), Positives = 45/59 (76%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 431
WG +VD +V++DP TK S+GFGF+T++ + A N+RPHK+ G+ V+ KRA+PRE++
Sbjct: 93 WGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQM 151
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
LR YF TFG + V ++ G+ RG GFV ++D + DR CL N
Sbjct: 185 LRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CLAHN 225
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 503 RLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+L YFS +G +V V+ D T RGFGFV F
Sbjct: 85 QLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 118
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 166 YEEPEHTRKLFIGGLDYRTTDSSLKEFY 249
++ P RKLFIGGL + TTD L ++
Sbjct: 63 HDSPPQLRKLFIGGLSHDTTDEQLGNYF 90
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/86 (39%), Positives = 55/86 (63%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+GE+ + +VM+DP TKR++GFGFIT+ VD+ NNR H++DG+ ++PK A P+
Sbjct: 68 FGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKR--T 125
Query: 435 RPEASATVKKLFVAGLKQDIEEEDLE 512
+ + KK+F+ GL ED++
Sbjct: 126 QAKLVTKTKKVFIGGLSATSTLEDMK 151
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/64 (34%), Positives = 41/64 (64%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 413
+K+ +G++ D ++M D T+R +GFGF+T+ + D+ H+I+G++VE K+A
Sbjct: 150 MKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKA 209
Query: 414 VPRE 425
P+E
Sbjct: 210 QPKE 213
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
+++YF T+G + ++ DK T + RGFGFV FD + D+VC H+I
Sbjct: 150 MKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEI 199
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
LR+YF FG + V+ D T + RGFGF+ F D VD+V + H++
Sbjct: 61 LRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHEL 110
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 148 SESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFY 249
++S D + K+FIGGL ++TT +L++++
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYF 65
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/86 (39%), Positives = 55/86 (63%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+GE+ + +VM+DP TKR++GFGFIT+ VD+ NNR H++DG+ ++PK A P+
Sbjct: 68 FGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKR--T 125
Query: 435 RPEASATVKKLFVAGLKQDIEEEDLE 512
+ + KK+F+ GL ED++
Sbjct: 126 QAKLVTKTKKVFIGGLSATSTLEDMK 151
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/64 (34%), Positives = 41/64 (64%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 413
+K+ +G++ D ++M D T+R +GFGF+T+ + D+ H+I+G++VE K+A
Sbjct: 150 MKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKA 209
Query: 414 VPRE 425
P+E
Sbjct: 210 QPKE 213
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
+++YF T+G + ++ DK T + RGFGFV FD + D+VC H+I
Sbjct: 150 MKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEI 199
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
LR+YF FG + V+ D T + RGFGF+ F D VD+V + H++
Sbjct: 61 LRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHEL 110
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 148 SESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFY 249
++S D + K+FIGGL ++TT +L++++
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYF 65
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +2
Query: 500 RRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
+ L EYF FG+I V+TD+ T K RG+GFV D +R C N
Sbjct: 49 KTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPN 97
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGR 392
+G+I + VV+ D T++S+G+GF+T + A + IDGR
Sbjct: 58 FGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGR 103
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 190 KLFIGGLDYRTTDSSLKEFYE 252
K+F+GGL Y T+D +L E++E
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFE 56
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 7e-06
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
+R FS GN++S+ +V D+ETGK +G+GF+EF D
Sbjct: 34 IRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPD 68
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIV 398
I+ I G ++ + ++ D +T + KG+GFI + + A +N +++ GRI+
Sbjct: 34 IRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRIL 89
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
L YFS GN+ +V +V D+ETG+ RGF FVEF + R Q N
Sbjct: 20 LGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFN 66
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
L +FS+ G I +V +V D+ETG+ RGF F+EF + R Q N
Sbjct: 21 LGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMN 67
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +2
Query: 518 FSTFGNIVSVSVVTDKETGKKRGFGFVEFD 607
F FG++V++S+ D E+GK RGFGFVEFD
Sbjct: 31 FIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVPREEI 431
+G++V + + D ++ + +GFGF+ + A A N ++ G+ + A P +
Sbjct: 34 FGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPKAT 93
Query: 432 KRPE 443
+R +
Sbjct: 94 ERSQ 97
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 44.4 bits (100), Expect = 9e-05
Identities = 30/87 (34%), Positives = 39/87 (44%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+GE+ V D RS+GF F+ ++ A R I G+ VE K A RE
Sbjct: 52 YGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSREN-- 109
Query: 435 RPEASATVKKLFVAGLKQDIEEEDLES 515
KK+FV GL D E+DL S
Sbjct: 110 --------KKVFVGGLPSDYSEQDLRS 128
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 640
LR +F FG + + DK+T +R F F+ F++ + D+ Q
Sbjct: 126 LRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKRFNIWM*KK 685
L +F+ +G + V D+ G+ RGF FVEF + + IK ++ +
Sbjct: 45 LSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
Query: 686 PISEN*HVWAG 718
EN V+ G
Sbjct: 105 KSRENKKVFVG 115
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPR 422
+G++ D+ D +TK + F FI + + D+A + R + K+AVP+
Sbjct: 133 FGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 44.4 bits (100), Expect = 9e-05
Identities = 30/87 (34%), Positives = 39/87 (44%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+GE+ V D RS+GF F+ ++ A R I G+ VE K A RE
Sbjct: 52 YGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSREN-- 109
Query: 435 RPEASATVKKLFVAGLKQDIEEEDLES 515
KK+FV GL D E+DL S
Sbjct: 110 --------KKVFVGGLPSDYSEQDLRS 128
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 640
LR +F FG + + DK+T +R F F+ F++ + D+ Q
Sbjct: 126 LRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKRFNIWM*KK 685
L +F+ +G + V D+ G+ RGF FVEF + + IK ++ +
Sbjct: 45 LSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPA 104
Query: 686 PISEN*HVWAG 718
EN V+ G
Sbjct: 105 KSRENKKVFVG 115
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPR 422
+G++ D+ D +TK + F FI + + D+A + R + K+AVP+
Sbjct: 133 FGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 515 YFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
YF+ G++ +V +V D+ETG+ RGF FVEF + R Q N
Sbjct: 25 YFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLN 68
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 500 RRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 652
++LRE F FG++ V+ D T K +G+GFV + + +R Q N Q
Sbjct: 36 QKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 86
Score = 34.7 bits (76), Expect = 0.073
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 359
+G++ D V++D T +SKG+GF++Y + + A
Sbjct: 45 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 652
+R+ F++FG I V + K +G+ FV+FD+ D + +Q N+Q
Sbjct: 143 IRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQ 185
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 500 RRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 652
++LRE F FG++ V+ D T K +G+GFV + + +R Q N Q
Sbjct: 46 QKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 96
Score = 34.7 bits (76), Expect = 0.073
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 359
+G++ D V++D T +SKG+GF++Y + + A
Sbjct: 55 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 652
+R+ F++FG I V + K +G+ FV+FD+ D + +Q N+Q
Sbjct: 153 IRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQ 195
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 500 RRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 652
++LRE F FG++ V+ D T K +G+GFV + + +R Q N Q
Sbjct: 149 QKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 199
Score = 34.7 bits (76), Expect = 0.073
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 359
+G++ D V++D T +SKG+GF++Y + + A
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 652
+R+ F++FG I V + K +G+ FV+FD+ D + +Q N+Q
Sbjct: 256 IRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQ 298
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 500 RRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 652
++LRE F FG++ V+ D T K +G+GFV + + +R Q N Q
Sbjct: 117 QKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 167
Score = 34.7 bits (76), Expect = 0.073
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 359
+G++ D V++D T +SKG+GF++Y + + A
Sbjct: 126 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQ 652
+R+ F++FG I V + K +G+ FV+FD+ D + +Q N+Q
Sbjct: 224 IRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQ 266
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 497 RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
+ +L YF +G+I SV++ D +TG RGF + FD D ++ Q+ H I
Sbjct: 38 KSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVI 90
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVP 419
+G I V + DP T +GF IT+ ++A RPH IDG V+ + +P
Sbjct: 48 YGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +2
Query: 497 RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
+ +L FS FG I S V+TD + GK +GFGFV F D D + + N I
Sbjct: 251 QEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLNDSI 302
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 607
LR++FS+FG I S V+ D E G+ +GFGFV F+
Sbjct: 359 LRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFE 391
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +2
Query: 497 RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
+ +L FS FG I S V+TD + GK +GFGFV F D D + + N I
Sbjct: 251 QEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLNDSI 302
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 607
LR++FS+FG I S V+ D E G+ +GFGFV F+
Sbjct: 359 LRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFE 391
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
L++ F ++GNI S V+TD E G+ +GFGFV F+ + + N ++
Sbjct: 333 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKM 381
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 497 RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+ L + F+ FGNI S V+T + GK +GFGFV F
Sbjct: 226 KETLEKVFAKFGNITSCEVMTVE--GKSKGFGFVAF 259
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQ 338
+K+ ++G I VM D + RSKGFGF+ + +
Sbjct: 333 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
L++ F ++GNI S V+TD E G+ +GFGFV F+ + + N ++
Sbjct: 273 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKM 321
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 497 RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+ L + F+ FGNI S V+T + GK +GFGFV F
Sbjct: 166 KETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAF 199
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQ 338
+K+ ++G I VM D + RSKGFGF+ + +
Sbjct: 273 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 306
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
L++ F ++GNI S V+TD E G+ +GFGFV F+ + + N ++
Sbjct: 270 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKM 318
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 497 RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+ L + F+ FGNI S V+T + GK +GFGFV F
Sbjct: 163 KETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAF 196
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQ 338
+K+ ++G I VM D + RSKGFGF+ + +
Sbjct: 270 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 303
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
L++ F ++GNI S V+TD E G+ +GFGFV F+ + + N ++
Sbjct: 333 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKM 381
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 497 RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+ L + F+ FGNI S V+T + GK +GFGFV F
Sbjct: 226 KETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAF 259
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQ 338
+K+ ++G I VM D + RSKGFGF+ + +
Sbjct: 333 LKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 500 RRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV 622
R L E+FS G + V ++TD TG+ +G +VEF D + V
Sbjct: 39 RDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 500 RRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV 622
R L E+FS G + V ++TD TG+ +G +VEF D + V
Sbjct: 184 RDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 607
LRE S +GNI S + DK T +G+GFV+F+
Sbjct: 123 LREMCSKYGNIASTKAIMDKATNNCKGYGFVDFE 156
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/87 (25%), Positives = 37/87 (42%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+G I + D T KG+GF+ + A +DG E +A +++
Sbjct: 130 YGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA-------VDGLNTEGVQA-QMAKLQ 181
Query: 435 RPEASATVKKLFVAGLKQDIEEEDLES 515
+ E T L++A L D E+ LE+
Sbjct: 182 QQEQDPT--NLYIANLPLDFTEQMLET 206
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 607
LRE S +GNI S + DK T +G+GFV+F+
Sbjct: 97 LREMCSKYGNIASTKAIMDKATNNCKGYGFVDFE 130
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/87 (25%), Positives = 37/87 (42%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIK 434
+G I + D T KG+GF+ + A +DG E +A +++
Sbjct: 104 YGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA-------VDGLNTEGVQA-QMAKLQ 155
Query: 435 RPEASATVKKLFVAGLKQDIEEEDLES 515
+ E T L++A L D E+ LE+
Sbjct: 156 QQEQDPT--NLYIANLPLDFTEQMLET 180
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 625
L F FG I++ +++D TG +G GFV FD D D
Sbjct: 144 LESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 497 RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+ +R F++ G I S +V DK TG+ G+GFV +
Sbjct: 55 QEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNY 90
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 503 RLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
+LRE F FG + ++ D T K +G+GFV + + +R + N
Sbjct: 147 KLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMN 194
Score = 31.9 bits (69), Expect = 0.51
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 359
+GE+ + +++D T + KG+GF++Y + + A
Sbjct: 155 FGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERA 189
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 37.9 bits (84), Expect = 0.008
Identities = 12/31 (38%), Positives = 24/31 (77%)
Frame = +2
Query: 518 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
FS +G +++++++ DK+TGK +GF F+ + D
Sbjct: 58 FSQYGEVMNINLIRDKDTGKSKGFAFLCYKD 88
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 368
+GE++++ +++D T +SKGF F+ Y A +N
Sbjct: 61 YGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDN 98
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 625
+ E+F G IV ++ DK T K++ F ++EFDD ++
Sbjct: 71 IEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIE 110
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 258 GEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 359
G+IV + KD TK+ K F +I + + ++ A
Sbjct: 79 GQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 607
LR+ F FG I +V D+ +G RGFGF+ F+
Sbjct: 92 LRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFN 125
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD-YDPVDRVCLQQNHQI--KRFNIWM 676
L + F+ FG+IVS V D+ T + + FGFV +D+ + + QI KR + +
Sbjct: 445 LIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQL 504
Query: 677 *KKPISEN 700
K+P +E+
Sbjct: 505 -KRPRNES 511
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN--NRPHKIDG--RIVE 401
++ + +G+I + ++KD T KG F+TY Q + + G R ++
Sbjct: 45 LRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQ 104
Query: 402 PKRAVPREEIKRPEASATVKKLFVAGL-KQDIEEE 503
K A P+ KKLF+ L KQ E+E
Sbjct: 105 VKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDE 139
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 625
+ E+F G+IV ++ DK T K++ F ++EFDD ++
Sbjct: 77 VEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIE 116
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD-YDPVDRVCLQQNHQI--KRFNIWM 676
L + F+ FG+IVS V D+ T + + FGFV +D+ + + QI KR + +
Sbjct: 445 LIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQL 504
Query: 677 *KKPISEN 700
K+P +E+
Sbjct: 505 -KRPRNES 511
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN--NRPHKIDG--RIVE 401
++ + +G+I + ++KD T KG F+TY Q + + G R ++
Sbjct: 45 LRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQ 104
Query: 402 PKRAVPREEIKRPEASATVKKLFVAGL-KQDIEEE 503
K A P+ KKLF+ L KQ E+E
Sbjct: 105 VKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDE 139
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 488 RH*RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+H LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 KRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 413
+R+ +G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 414 VPREEIKRPEASATVKKLFVAGLKQDIEEEDL 509
P + R E +KLF+ L + EE+L
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEENL 158
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 518 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
F+ FG I+S V DK T + FGFV +++
Sbjct: 519 FAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 252 AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVP--R 422
A+G ++ V ++ + + SKGFGF+T ++A+ + GRI+E +RA P R
Sbjct: 73 AYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPTRR 130
Query: 423 EEIKRPE 443
+ I P+
Sbjct: 131 KLINNPQ 137
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 488 RH*RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+H LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 KRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 413
+R+ +G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 414 VPREEIKRPEASATVKKLFVAGLKQDIEEEDL 509
P + R E +KLF+ L + EE+L
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEENL 158
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 518 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
F+ FG I+S V DK T + FGFV +++
Sbjct: 519 FAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHK-IDGR 392
++R +G+I DV + +D +++SKGFGF+ + + + A + K +DGR
Sbjct: 35 LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
LR F +G+I V + DK + + +GFGFV F
Sbjct: 35 LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHK-IDGR 392
++R +G+I DV + +D +++SKGFGF+ + + + A + K +DGR
Sbjct: 35 LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
LR F +G+I V + DK + + +GFGFV F
Sbjct: 35 LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 488 RH*RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+H LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 KRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 413
+R+ +G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 414 VPREEIKRPEASATVKKLFVAGLKQDIEEEDL 509
P + R E +KLF+ L + EE+L
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEENL 158
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 518 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
F+ FG I+S V DK T + FGFV +++
Sbjct: 448 FAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 478
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 488 RH*RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+H LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 KRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 413
+R+ +G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 414 VPREEIKRPEASATVKKLFVAGLKQDIEEEDL 509
P + R E +KLF+ L + EE+L
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEENL 158
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 488 RH*RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+H LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 KRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 413
+R+ +G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 414 VPREEIKRPEASATVKKLFVAGLKQDIEEEDL 509
P + R E +KLF+ L + EE+L
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEENL 158
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 488 RH*RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
+H LRE F+ FG+I SV+ D++ GK RG FV F
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 KRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 413
+R+ +G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 414 VPREEIKRPEASATVKKLFVAGLKQDIEEEDL 509
P + R E +KLF+ L + EE+L
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEENL 158
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 518 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
F+ FG I+S V DK T + FGFV +++
Sbjct: 519 FAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 252 AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVP--R 422
A+G ++ V ++ + + SKGFGF+T ++A+ + GRI+E +RA P R
Sbjct: 73 AYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAALHESHVQGRIIEVRRATPTRR 130
Query: 423 EEIKRPE 443
+ I P+
Sbjct: 131 KLINNPQ 137
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 35.9 bits (79), Expect = 0.032
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 500 RRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
+ L YF FGN++ + V ++ TG +G+ +V FD+
Sbjct: 46 KELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDN 82
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 503 RLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
+LR F +G I +++V D E GK RG+ F+E+ D
Sbjct: 119 KLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSD 153
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 130 ILNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSL-KEFYEHGE 261
I P+E+ E+P T LF+G ++Y T++S L +EF +G+
Sbjct: 87 IATWNPAENPRASEDPYRT--LFVGRINYETSESKLRREFEAYGK 129
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV 622
+ E+F+ G + V++ DK TG ++ F FVEF + V
Sbjct: 62 IEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESV 100
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 34.7 bits (76), Expect = 0.073
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
L+ F+ FG + V+ D +T K +G+GFV F
Sbjct: 151 LKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSF 183
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 255 WGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 359
+GE+ + V++D +T++SKG+GF+++ + A
Sbjct: 158 FGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENA 192
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.073
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 261 EIVDVVVMKDPKTK---RSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI 431
E + VV + K K SKGFGF+ S ++ H IDGR + K R++
Sbjct: 194 EDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQ 253
Query: 432 KRPEASATVKKLFVAGLKQDIEEEDL 509
RP ++ ++FV L ++E L
Sbjct: 254 GRP----SISRIFVGRLTDKVDEHQL 275
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +2
Query: 509 REYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQI 655
++YF G +V + K G +GFGFV ++V H I
Sbjct: 190 QKYFEDIGTVVFCEIKR-KSDGNSKGFGFVRMSSVGEQNKVLAIPQHMI 237
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 604
L+ F +G + V VV DK+TG +GF VEF
Sbjct: 295 LQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEF 327
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 500 RRLREYFSTFGNIVSVSVVTDKETGKK---RGFGFVEFDDYDPVDR 628
+ + F TFG + ++ + K+ G+K RGFGFV+F D R
Sbjct: 762 KEVETLFETFGAVKTIRI--PKKPGQKQQHRGFGFVDFISADEAHR 805
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 515 YFST-FGNIVSVSVVTDKETGKKRGFGFVEF 604
+FS G + +V +V DK+TGK +GF FV F
Sbjct: 265 FFSAQIGPVEAVRIVRDKDTGKGKGFAFVNF 295
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 163 DYEEPEHTRKLFIGGLDYRTTDSSLKE-FYEHG 258
DY P +RK+F+GG+ + T+++LK+ F E G
Sbjct: 287 DYTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 319
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 386 RKNCRAKTSSSKGRD*KTRS*CHR*KVVCSWTEARH*RRRLREYFSTFGNIVSVSVVTDK 565
R R + +S R RS +VV + L E FS +G I +V + D+
Sbjct: 109 RSGSRQRRRASPRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDR 168
Query: 566 -ETGKKRGFGFVEFDDYDPVDR 628
RG+G+VE+D+ + ++
Sbjct: 169 FHNHVHRGYGYVEYDNLEDAEK 190
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 KRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRA 413
+R+ +G + +++D T+ SKG F+T+ EAQ + K+ + P +
Sbjct: 72 RRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQM 131
Query: 414 VPREEIKRPEASATVKKLFVAGLKQDIEEEDL 509
P + R E +KLF+ L + EE+L
Sbjct: 132 KPADTENRNE-----RKLFIGQLSKKHNEENL 158
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 488 RH*RRRLREYFSTFGNIVSVSVVTDKETGKKRG 586
+H LRE F+ FG+I SV+ D++ GK RG
Sbjct: 152 KHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 530 GNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 625
G +VSV++ D+ T +GFGFVEF + D
Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 GEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVPREEIK 434
G +V V + KD T +GFGF+ + D A + K+ G+ ++ +A E K
Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHE--K 94
Query: 435 RPEASATVKKLFVAGLKQDIEEE 503
+ A + FV L +++E+
Sbjct: 95 NMDVGANI---FVGNLDPEVDEK 114
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 530 GNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 625
G +VSV++ D+ T +GFGFVEF + D
Sbjct: 47 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 GEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVPREEIK 434
G +V V + KD T +GFGF+ + D A + K+ G+ ++ +A E K
Sbjct: 47 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHE--K 104
Query: 435 RPEASATVKKLFVAGLKQDIEEE 503
+ A + FV L +++E+
Sbjct: 105 NMDVGANI---FVGNLDPEVDEK 124
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 518 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
FS FG I + +V D+ +G + F+EFD+
Sbjct: 261 FSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 518 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
FS FG I + +V D+ +G + F+EFD+
Sbjct: 261 FSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 518 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
FS FG I + +V D+ +G + F+EFD+
Sbjct: 192 FSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 518 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
F+ FG I+S V DK T + FGFV +++
Sbjct: 355 FAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 385
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 607
LR F FG I S+++ D TG + F FVE++
Sbjct: 118 LRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 359
+K + A+GEIV + + P + +GFG++ ++ EA
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
L+ F FG IV + RGFG++EF++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 607
LR F FG I S+++ D TG + F FVE++
Sbjct: 118 LRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 359
+K + A+GEIV + + P + +GFG++ ++ EA
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
L+ F FG IV + RGFG++EF++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 607
LR F FG I S+++ D TG + F FVE++
Sbjct: 118 LRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 359
+K + A+GEIV + + P + +GFG++ ++ EA
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
L+ F FG IV + RGFG++EF++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
>Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical
protein F32D8.13 protein.
Length = 187
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 497 RRRLREYFSTFGNIVSVSVVTDKETGKKRGFGFVE 601
RR EYFS V++ + T +E K+RG+ FVE
Sbjct: 107 RRTDYEYFSANYRTVTIRIETSEEDRKQRGYQFVE 141
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 258 GEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREEIK 434
G +VDV ++ + + SKGFGF+T D A+ I+GR VE A R K
Sbjct: 6 GPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 63
Query: 435 RPEASATV 458
+ + +V
Sbjct: 64 KAKPLMSV 71
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 518 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
F G +V V ++ + E G K GFGFV + D DR + N
Sbjct: 2 FEKVGPVVDVEIIFN-ERGSK-GFGFVTMQNPDDADRARAEFN 42
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 258 GEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREEIK 434
G +VDV ++ + + SKGFGF+T D A+ I+GR VE A R K
Sbjct: 124 GPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
Query: 435 RPEASATV 458
+ + +V
Sbjct: 182 KAKPLMSV 189
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
L F G +V V ++ + E G K GFGFV + D DR + N
Sbjct: 116 LTAMFEKVGPVVDVEIIFN-ERGSK-GFGFVTMQNPDDADRARAEFN 160
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 258 GEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREEIK 434
G +VDV ++ + + SKGFGF+T D A+ I+GR VE A R K
Sbjct: 124 GPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
Query: 435 RPEASATV 458
+ + +V
Sbjct: 182 KAKPLMSV 189
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
L F G +V V ++ + E G K GFGFV + D DR + N
Sbjct: 116 LTAMFEKVGPVVDVEIIFN-ERGSK-GFGFVTMQNPDDADRARAEFN 160
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 506 LREYFS-TFGNIVSVSVVTDKETGKKRGFGFVEFDDYD 616
L +F T+G++V V + D + RG G V F DYD
Sbjct: 302 LAHFFEQTYGHVVCVGIDIDNKFKYPRGSGRVAFSDYD 339
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 264 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 443
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 444 ASATVKKLFV 473
+A K+ +V
Sbjct: 1804 ETARFKRSYV 1813
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 264 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 443
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 98 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 157
Query: 444 ASATVKKLFV 473
+A K+ +V
Sbjct: 158 ETARFKRSYV 167
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 264 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 443
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 179 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 238
Query: 444 ASATVKKLFV 473
+A K+ +V
Sbjct: 239 ETARFKRSYV 248
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 264 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 443
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 184 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 243
Query: 444 ASATVKKLFV 473
+A K+ +V
Sbjct: 244 ETARFKRSYV 253
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 264 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 443
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 444 ASATVKKLFV 473
+A K+ +V
Sbjct: 1804 ETARFKRSYV 1813
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 264 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 443
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 444 ASATVKKLFV 473
+A K+ +V
Sbjct: 1804 ETARFKRSYV 1813
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 258 GEIVDVVVMKDPKTKRSKGFGFITY 332
G+I D+ +M DP + S+G+ F+TY
Sbjct: 224 GKIWDLRLMMDPMSGASRGYAFVTY 248
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 539 VSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ-QNHQIKRFN 667
V V V D E K RGF FV+F D+ + + H+I+ FN
Sbjct: 311 VIVYSVPDNEKIKNRGFCFVDFIDHKTASDIKRKIAQHKIRPFN 354
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 506 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 610
+ ++F G++ V++ D+ +G +GF +VEF +
Sbjct: 94 IEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTE 128
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKR 410
+K + +G + DV ++ + + SKGFGF+T + + A Q I+GR +E
Sbjct: 169 LKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNC 226
Query: 411 AVPREEIKR 437
A R K+
Sbjct: 227 ATARVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 234 IKRIL*AWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPKR 410
+K + +G + DV ++ + + SKGFGF+T + + A Q I+GR +E
Sbjct: 169 LKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNC 226
Query: 411 AVPREEIKR 437
A R K+
Sbjct: 227 ATARVHSKK 235
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 512 EYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQN 646
E F FG I++V+ ++GFGFV+F++ D C N
Sbjct: 102 ELFRPFGKIIAVNYFA------QQGFGFVQFNEAGSADESCRSLN 140
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 530 GNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKRFNI 670
GNI+SV + +K K RG GF P ++ NH+ RF +
Sbjct: 102 GNIISVGIHKEKPACK-RGGGFGTNRSMAPCPPAIIKNNHEGGRFGV 147
>U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical
protein ZK328.6 protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 384 DGRIVEPKRAVPREEIKRPEASATVKKLFVAG 479
+G + +PK+ V ++ +K+ + A +KKL VAG
Sbjct: 323 EGVLPKPKKKVVKKVVKKKKPIAFIKKLEVAG 354
>AC087081-13|AAK66033.1| 253|Caenorhabditis elegans Hypothetical
protein Y82E9BL.6 protein.
Length = 253
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = -1
Query: 682 FSHPNVESFNLVILLQAYSVNWIIIIKLYKTKAPFLSCFFICHNTNRNNI 533
++HP+ FN++ L ++ IIK+ A ++C+ HN+ + N+
Sbjct: 168 WTHPSQNEFNIINKLWPETIYLCPIIKIMSIPAVIIACY--AHNSAKINL 215
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 24.6 bits (51), Expect(2) = 8.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 254 MGRNCRCSCNERPKNQEIKRI 316
M NCR SCN E++R+
Sbjct: 634 MAENCRSSCNSCYTQSELRRM 654
Score = 21.4 bits (43), Expect(2) = 8.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 239 KNSMSMGRNCRCSC 280
KN+ M NCR SC
Sbjct: 586 KNTRYMACNCRVSC 599
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,070,942
Number of Sequences: 27780
Number of extensions: 319097
Number of successful extensions: 1104
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -