Silkworm BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0022
         (598 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g61320.1 68418.m07695 cytochrome P450, putative Similar to  C...    28   4.1  
At1g29110.1 68414.m03563 cysteine proteinase, putative contains ...    27   7.2  

>At5g61320.1 68418.m07695 cytochrome P450, putative Similar to
           Cytochrome P450 89A2 (SP:Q42602)[Arabidopsis thaliana];
           contains Pfam profile: PF00067 cytochrome P450
          Length = 497

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 219 SSWXXGATCKIYRRN*AKP--PPLCVRSLSNASKEFALSLCSR 341
           SS   GAT ++ RRN       P  V+S SNA +    +LCSR
Sbjct: 119 SSGSYGATWRLLRRNLTSEILHPSRVKSYSNARRSVLENLCSR 161


>At1g29110.1 68414.m03563 cysteine proteinase, putative contains
           similarity to cysteine protease SPCP1 GI:13491750 from
           [Ipomoea batatas]
          Length = 334

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -3

Query: 296 APYTQRRGFRLVPSIN 249
           AP+TQ RGF++VPS N
Sbjct: 220 APHTQIRGFQMVPSHN 235


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,801,470
Number of Sequences: 28952
Number of extensions: 206824
Number of successful extensions: 373
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)