Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0004
(717 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 274 3e-74
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 272 2e-73
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 270 5e-73
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 270 5e-73
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 270 5e-73
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 270 5e-73
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 264 5e-71
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 264 5e-71
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 248 2e-66
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 239 1e-63
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 229 1e-60
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 205 3e-53
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 140 6e-34
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 125 3e-29
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 116 2e-26
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 101 5e-22
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 75 6e-14
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 70 1e-12
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 68 5e-12
At5g43500.2 68418.m05318 expressed protein 45 6e-05
At5g43500.1 68418.m05319 expressed protein 45 6e-05
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 33 0.19
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 1.3
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.8
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 29 4.1
At2g39440.1 68415.m04841 expressed protein 29 4.1
At2g42760.1 68415.m05295 expressed protein 28 5.4
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 28 5.4
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 28 7.1
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 27 9.4
At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative (CH... 27 9.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 274 bits (673), Expect = 3e-74
Identities = 125/140 (89%), Positives = 132/140 (94%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
+EKSYELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY
Sbjct: 238 VEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYG 297
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 347
N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 346 WISKQEYDESGPSIVHRKCF 287
WI+K EYDESGPSIVHRKCF
Sbjct: 358 WIAKAEYDESGPSIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 272 bits (666), Expect = 2e-73
Identities = 124/140 (88%), Positives = 132/140 (94%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
+EK+YELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY
Sbjct: 238 VEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYG 297
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 347
N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 346 WISKQEYDESGPSIVHRKCF 287
WISK EYDESGPSIVHRKCF
Sbjct: 358 WISKSEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 270 bits (663), Expect = 5e-73
Identities = 122/140 (87%), Positives = 132/140 (94%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIMKCDVDIRKDLY
Sbjct: 238 VEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYG 297
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 347
N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 346 WISKQEYDESGPSIVHRKCF 287
WI+K EYDESGPSIVHRKCF
Sbjct: 358 WIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 270 bits (663), Expect = 5e-73
Identities = 123/140 (87%), Positives = 131/140 (93%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY
Sbjct: 238 IEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYG 297
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 347
N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 346 WISKQEYDESGPSIVHRKCF 287
WISK EYDE+GP IVHRKCF
Sbjct: 358 WISKAEYDEAGPGIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 270 bits (663), Expect = 5e-73
Identities = 122/140 (87%), Positives = 132/140 (94%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIMKCDVDIRKDLY
Sbjct: 238 VEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYG 297
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 347
N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 346 WISKQEYDESGPSIVHRKCF 287
WI+K EYDESGPSIVHRKCF
Sbjct: 358 WIAKAEYDESGPSIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 270 bits (663), Expect = 5e-73
Identities = 123/140 (87%), Positives = 131/140 (93%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY
Sbjct: 238 IEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYG 297
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 347
N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 346 WISKQEYDESGPSIVHRKCF 287
WISK EYDE+GP IVHRKCF
Sbjct: 358 WISKAEYDEAGPGIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 264 bits (646), Expect = 5e-71
Identities = 121/140 (86%), Positives = 129/140 (92%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYNSIMKCDVDIRKDLY
Sbjct: 238 VEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYG 297
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 347
N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 346 WISKQEYDESGPSIVHRKCF 287
WI+K EYDESGPSIVHRKCF
Sbjct: 358 WIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 264 bits (646), Expect = 5e-71
Identities = 121/140 (86%), Positives = 129/140 (92%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYNSIMKCDVDIRKDLY
Sbjct: 238 VEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYG 297
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 347
N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 346 WISKQEYDESGPSIVHRKCF 287
WI+K EYDESGPSIVHRKCF
Sbjct: 358 WIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 248 bits (608), Expect = 2e-66
Identities = 111/140 (79%), Positives = 124/140 (88%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
++++YELPDGQVITIG ERFRCPE LFQ S +GME GIHETTYNSIMKCDVDIRKDLY
Sbjct: 239 IDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYG 298
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 347
N VLSGGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGSILASLS+F M
Sbjct: 299 NIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPM 358
Query: 346 WISKQEYDESGPSIVHRKCF 287
WI+K EYDE G +IVHRKCF
Sbjct: 359 WITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 239 bits (586), Expect = 1e-63
Identities = 107/140 (76%), Positives = 123/140 (87%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
++++YELPDGQVITIG ERFRCPE LFQPS +GME GIHE TYNSIMKCD DIRKDLY
Sbjct: 190 IDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYG 249
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 347
N VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSVWIGGSILASLST++QM
Sbjct: 250 NIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQM 309
Query: 346 WISKQEYDESGPSIVHRKCF 287
WI+K EY+E+GP+IVH KCF
Sbjct: 310 WITKAEYEENGPAIVHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 229 bits (560), Expect = 1e-60
Identities = 106/124 (85%), Positives = 115/124 (92%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY
Sbjct: 238 IEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYG 297
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 347
N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQ+
Sbjct: 298 NIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQV 357
Query: 346 WISK 335
I +
Sbjct: 358 KIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 205 bits (500), Expect = 3e-53
Identities = 91/142 (64%), Positives = 112/142 (78%)
Frame = -3
Query: 715 GPPLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKD 536
G ++K+Y LPDGQ ITI ERF CPE LFQPS +G E+ GIHE T NSI+KC VD R+D
Sbjct: 224 GWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRD 283
Query: 535 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 356
+Y N +++GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGSILASLSTF
Sbjct: 284 MYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTF 343
Query: 355 QQMWISKQEYDESGPSIVHRKC 290
QMWI+K EY+E G +IVHRKC
Sbjct: 344 HQMWITKDEYEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 140 bits (340), Expect = 6e-34
Identities = 69/151 (45%), Positives = 100/151 (66%), Gaps = 15/151 (9%)
Frame = -3
Query: 697 SYELPDGQVITIGNERFRCPEALFQPSFL----GMEAC--------GIHETTYNSIMKCD 554
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ SI KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 553 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP---PERKYSVWIGG 383
VDIR++LY++ +L+GGT+ + +R++K++ +P + ++K++A ER++SVWIGG
Sbjct: 350 VDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGG 409
Query: 382 SILASLSTFQQMWISKQEYDESGPSIVHRKC 290
SILASL +FQQMW SK EY+E G S + RKC
Sbjct: 410 SILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 125 bits (302), Expect = 3e-29
Identities = 66/144 (45%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Frame = -3
Query: 700 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANT 521
+ + LPDGQVI+IG ER+ EALFQPS LG+E GI E I + + L NT
Sbjct: 221 EQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENT 280
Query: 520 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSILASLST 359
VL GGTT G R QKE L S ++ ++ PPE YS W+GG+ILA +
Sbjct: 281 VLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVF 339
Query: 358 FQQMWISKQEYDESGPSIVHRKCF 287
Q ++K +YDE+GPS+VHRKCF
Sbjct: 340 PQNQHVTKADYDETGPSVVHRKCF 363
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 116 bits (278), Expect = 2e-26
Identities = 58/149 (38%), Positives = 94/149 (63%), Gaps = 12/149 (8%)
Frame = -3
Query: 706 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYA 527
L K+Y LPDG+VI +G ERF+ PEALF P + +E G+ + + I + D+D R LY
Sbjct: 237 LVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQ 296
Query: 526 NTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWIGGS 380
+ VLSGG+TMYPG+ R++KEI T L + ++++I PP RK+ V++GG+
Sbjct: 297 HIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGA 356
Query: 379 ILAS-LSTFQQMWISKQEYDESGPSIVHR 296
+LA + + WI++++Y E G + +++
Sbjct: 357 VLAGIMKDAPEFWINREDYMEEGINCLNK 385
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 101 bits (242), Expect = 5e-22
Identities = 48/128 (37%), Positives = 74/128 (57%)
Frame = -3
Query: 670 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 491
I + NERF PE LFQP+ LGM G+ E +I C ++ LY + +L+GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 490 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 311
+ +R++ E+ L P +KI + VW GGS+LAS F+ M ++K EY+E G
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGS 412
Query: 310 SIVHRKCF 287
+ R+ F
Sbjct: 413 ARCRRRFF 420
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 74.5 bits (175), Expect = 6e-14
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = -3
Query: 670 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTT 500
I IG ERFRCPE LF P+ +G++ G+ E SI + + ++ + L ++ +++GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 499 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 320
+ PG+ +R++ I + P I ++ + W G S A+ F +K +YDE
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDE 708
Query: 319 SG 314
G
Sbjct: 709 KG 710
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 70.1 bits (164), Expect = 1e-12
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Frame = -3
Query: 703 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCD-VDIRKD--L 533
+ S E+ T+ ERF+ E LFQP GM A +H+ + CD + D
Sbjct: 332 QASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSW 391
Query: 532 YANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLST 359
+ VL+GG+ PG+++R+++E+ PS++ I++I PP + W G ++++LS
Sbjct: 392 FKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSI 451
Query: 358 FQQMW-ISKQEY 326
F W I+++++
Sbjct: 452 FPGPWCITRKQF 463
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 68.1 bits (159), Expect = 5e-12
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Frame = -3
Query: 664 IGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 488
+G ERF PE F P + + I +D R+ LY N VLSGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 487 IADRMQKEITALAPS----------------TMKIKIIAPPERKYSVWIGGSILASLSTF 356
R+Q+++ + + +++ +++ P ++++VW GGS+L+S F
Sbjct: 340 FGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEF 399
Query: 355 QQMWISKQEYDESGPSI 305
+K+EY+E G SI
Sbjct: 400 FASCRTKEEYEEYGASI 416
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Frame = -3
Query: 604 EACGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 428
E G+ E +SI+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 427 II----APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 314
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Frame = -3
Query: 604 EACGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 428
E G+ E +SI+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 427 II----APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 314
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -3
Query: 592 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 413
I E Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 412 ERKYS 398
+RK++
Sbjct: 393 DRKHA 397
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 389 DPYGVLPLWRSNDLNLHCRW-GESCD 463
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 383 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDS 490
S DP GVL W HC W G +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -2
Query: 428 DHCSSREEVLRMDRWIDPRLPLYLPTDVDLETGVRRV 318
D C + +L MDR + P+ + + D+D+ T V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 338 RDP-HLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCD 463
R+P G E GEDR DP + + R NDL + + + D
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAAD 81
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2
Query: 467 GNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPL-YLPTDVDLETGVRRVW 315
GN ++RP +E DHC R+ ++ I R+P ++VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = -3
Query: 592 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 413
I E Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 412 ERKYS 398
ERK++
Sbjct: 394 ERKHA 398
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 392 PYGVLPLWRSNDLNLHCRWGESCDF 466
P GV+PL NDL+ WG S F
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPF 216
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 392 PYGVLPLWRSNDLNLHCRWGESCDF 466
P GV+PL NDL+ WG S F
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPF 213
>At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative
(CHX23) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 867
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 405 FLSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKSLRMSTSHFM 566
FLSG M L +I+ G RA I F ++ MVV ++ L + TS FM
Sbjct: 333 FLSGILMPLFYIICGLRADIGFMLQFTDKFMMVVVICSSFLVKIVTTVITSLFM 386
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,855,213
Number of Sequences: 28952
Number of extensions: 342880
Number of successful extensions: 1051
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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