Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0018
(502 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 246 9e-66
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 246 9e-66
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 246 9e-66
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 246 9e-66
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 246 9e-66
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 246 9e-66
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 244 2e-65
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 243 7e-65
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 237 2e-63
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 207 4e-54
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 180 7e-46
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 180 7e-46
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 178 2e-45
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 173 8e-44
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 153 9e-38
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 133 6e-32
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 101 2e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 83 8e-17
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 51 4e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 46 2e-05
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.050
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 1.4
Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical pr... 28 3.3
AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein. 28 3.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.4
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr... 27 5.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 5.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 5.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 5.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 5.8
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 27 5.8
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 7.6
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 27 7.6
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 27 7.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 246 bits (601), Expect = 9e-66
Identities = 111/115 (96%), Positives = 113/115 (98%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 246 bits (601), Expect = 9e-66
Identities = 111/115 (96%), Positives = 113/115 (98%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 246 bits (601), Expect = 9e-66
Identities = 111/115 (96%), Positives = 113/115 (98%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 246 bits (601), Expect = 9e-66
Identities = 111/115 (96%), Positives = 113/115 (98%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 246 bits (601), Expect = 9e-66
Identities = 111/115 (96%), Positives = 113/115 (98%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 246 bits (601), Expect = 9e-66
Identities = 111/115 (96%), Positives = 113/115 (98%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 244 bits (598), Expect = 2e-65
Identities = 110/115 (95%), Positives = 113/115 (98%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 243 bits (594), Expect = 7e-65
Identities = 108/115 (93%), Positives = 113/115 (98%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 237 bits (581), Expect = 2e-63
Identities = 106/113 (93%), Positives = 111/113 (98%)
Frame = +2
Query: 89 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHKSK 268
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +SK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 269 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKS 114
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 207 bits (505), Expect = 4e-54
Identities = 93/97 (95%), Positives = 95/97 (97%)
Frame = +2
Query: 137 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHKSKRGILTLKYPIEHGIVT 316
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +SKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 317 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 427
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 101
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 180 bits (437), Expect = 7e-46
Identities = 82/86 (95%), Positives = 84/86 (97%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKI 340
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 180 bits (437), Expect = 7e-46
Identities = 82/86 (95%), Positives = 84/86 (97%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKI 340
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 178 bits (434), Expect = 2e-45
Identities = 81/86 (94%), Positives = 84/86 (97%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDMEKI 340
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 173 bits (420), Expect = 8e-44
Identities = 78/83 (93%), Positives = 81/83 (97%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK 262
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 SKRGILTLKYPIEHGIVTNWDDM 331
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 153 bits (370), Expect = 9e-38
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +2
Query: 215 MVGMGQKDSYVGDGHKSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 394
MVGMGQKDSYVGD +SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 395 LLTEAPLNPKA 427
LLTEAPLNPKA
Sbjct: 61 LLTEAPLNPKA 71
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 133 bits (322), Expect = 6e-32
Identities = 57/106 (53%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHKSKRGILTL 286
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 287 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 421
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNP 116
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 101 bits (243), Expect = 2e-22
Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDGHKSKRGIL 280
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+ R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 281 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKA 427
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNS 118
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 83.4 bits (197), Expect = 8e-17
Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 13/125 (10%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 226
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 227 GQKDSYVGDGHKSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 403
D ++GD S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 404 EAPLN 418
E PLN
Sbjct: 121 EPPLN 125
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 51.2 bits (117), Expect = 4e-07
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHK--S 265
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD K +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 266 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 400
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 401 TEAPLNPKALQRR 439
+E+ N +A + +
Sbjct: 129 SESSWNDRARREK 141
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +2
Query: 98 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHKSKRGI 277
+ ++ DNG K G ++PR V SIV + +H+ V + + D K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQEECSD----KFSL 57
Query: 278 LTLKYPIEHGIVTNWDDMEKIWHHTF 355
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +2
Query: 98 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHKSKRGI 277
+ ++ DNG K G ++PR V SIV + +H+ V + + D K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQEECSD----KFSL 57
Query: 278 LTLKYPIEHGIVTNWDDMEKIWHHTF 355
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 35.5 bits (78), Expect = 0.022
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +1
Query: 190 GKAPPSGRDGRYGTEGLLCRRWAQEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 369
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 193 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGA 249
Query: 370 CRPRGTPRPAY*GSPQPQG 426
P G P PA G+P P G
Sbjct: 250 AGPPGPPGPA--GAPGPDG 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.050
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +1
Query: 190 GKAPPSGRDGRYGTEGLLCRRWAQEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 369
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 370 CRPRGTPRPAY*GSPQPQG 426
P G P PA G+P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 312 TIPCSMGYLRVRIPLLLLCPSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPAL 136
T+ S PL++ S S TITP +G+PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 135 HIPEPLSTTNAATSSS 88
+ STT A +++S
Sbjct: 511 TVTASPSTTGATSTAS 526
>Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical
protein F11C3.2 protein.
Length = 598
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 373 RPRGTPRPAY*GSPQPQGPTEEKMTPDSW-FENNSTRPAMYRRP 501
RP TP+ SP PTE+ +T D W E N + P Y P
Sbjct: 239 RPPPTPKRKTTQSPIHVVPTEKNITMDDWNAEMNISTPKPYMGP 282
>AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein.
Length = 598
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 373 RPRGTPRPAY*GSPQPQGPTEEKMTPDSW-FENNSTRPAMYRRP 501
RP TP+ SP PTE+ +T D W E N + P Y P
Sbjct: 239 RPPPTPKRKTTQSPIHVVPTEKNITMDDWNAEMNISTPKPYMGP 282
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 137 KAGFAGDDAPRAVFPSIVGRPRHQG 211
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical
protein F54D1.6 protein.
Length = 1423
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 239 SYVGDGHKSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 382
+Y GDG + + ++P +G V +DD + ++ ++V PE
Sbjct: 717 TYAGDGRQYNENLA--RFPTHYGQVCCYDDQGHLMQTSYQPVIKVTPE 762
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 162 ASSPAKPALHIPEPLSTTNAATSS 91
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 162 ASSPAKPALHIPEPLSTTNAATSS 91
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 162 ASSPAKPALHIPEPLSTTNAATSS 91
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 162 ASSPAKPALHIPEPLSTTNAATSS 91
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -2
Query: 255 PSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 91
PS T + P PT P G PT A+SP + +P+S++ ++TSS
Sbjct: 237 PSSTASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSS----QPVSSSTSSTSS 287
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 290 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 391
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 290 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 391
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 373 RPRGTPRPAY*GSPQPQGPTEEKMTP 450
RP+ P P +P PQ P +E+ TP
Sbjct: 384 RPKADPCPGGFCAPVPQAPQQERPTP 409
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 190 GKAPPSGRDGRYGTEGLLCRRWAQEQKRYPDPQIP 294
G P G G +GTEG ++ + K YP P P
Sbjct: 510 GPPGPMGLRGPHGTEGETGKQGPEGSKGYPGPMGP 544
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,931,451
Number of Sequences: 27780
Number of extensions: 314074
Number of successful extensions: 1198
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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